Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00802 ATGACTGGTCTGGTAATGGTAACCAGAGGCGGTGGTTGCGGTGGAGGACCCAAAAGAACAAGACCAACCCCAACACCTGAAGAAGAACAACAGAACCAACTTTCACTTGTAGCGTTACTCTTAGCAGCACTCAGAAAATCTATGGTAGCATGCAGAGTAGATCGACCTGATGAAGTCATCTCCACCGTTCATCACATCGACATGGAGATCGGATGGCCAACCGACGTTCAGCATATTACTCATGTTACCTTCGATCGCTTCAATGGCTTTCTCGGTCTCCCTGTTGAGTTCGAGGTTCAGATCCCTGGTCGTGTTCCCAGTGCTAGTGTAAGTGTGTTTGGCGTCTCAGCAGAATCTATGCAGTGTACTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTCATGCTAATGCAGGACCGTTTATATTCTCAGGGAGGATTGAAGGCTGAAGGTATATTTCGTATAAACCCAGAAAATAGTAAAGAGGAGCATGTGAGGAACCAGTTGAATTGTGGTATTGTGCCTGATGACATTGATGTCCACTGCTTGGCGGGACTAATAAAAGCATGGTTCCGAGAGCTTCCTTCCGGAGTGCTGGATGGACTTTCCCCTGAACAAGTTCTTCAGTGCAACACAGAAGAAGAATCTATTGAGCTTGTGAAGCAGCTAAAACCAACTGAGTCTGCCTTACTAAGTTGGGCCATTGATCTCATGGCTGATGTTGTCCAAGAGGAGGAGCATAACAAAATGAATGCAAGAAATATTGCGATGGTTTTTGCTCCAAACATGACTCAGATGTCCGATCCTCTAACTGCTCTAATGCACGCGGTTCAAGTGATGAACTTGCTCAAGACATTGATAATGAAAACCCTTAGGGAACGTGAAGAAACTGCAACAGGTGGATATTCACCAATGTCCTTTCGCTCATCATGTCGCCAGTCAGAGGATGAATACGACAGTCAGCGGGAAACAGAAACTATTGGCTATTCACCCATGTCGATTCGCTCATCATATCATTCTGAGGATGAATACGACAGTCAACGTGAAATGAACGCAAGCGGTGAATTGAGAAGGACAAAATCAGATTTTGACAATCACACTCATTACCGAAATAGCAGCAAAGAAGAATTGGAGGCTGAATCTCTGAGCGAGATAGAAGAATGCTTCTTAAAACAGTTGGATGACAGCACCCCCAAAGAATTACCAGAAGAACCTGCAGATTATTTGCAAGAATATCCAAACTCCAAAAGTTGCTGTGGCTATAATGTGGAACCTGATGTATTGATCACTGATAGCAAAAGTGCAAATTTCTGCTTGAGTTCCGATAGAGAAAAGTTAAAAGCGGACACAGCTATTCCATTACAAGGATGGAGAGACACCGAAGAAGTGGAGATGATTGATAAATTTACAGATTCTGTTTCGCCGGTGTCGCTGCTTGCATCCAGCTAA 1452 0.4408 MTGLVMVTRGGGCGGGPKRTRPTPTPEEEQQNQLSLVALLLAALRKSMVACRVDRPDEVISTVHHIDMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVQIPGRVPSASVSVFGVSAESMQCTYDSKGNSVPTILMLMQDRLYSQGGLKAEGIFRINPENSKEEHVRNQLNCGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESIELVKQLKPTESALLSWAIDLMADVVQEEEHNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETATGGYSPMSFRSSCRQSEDEYDSQRETETIGYSPMSIRSSYHSEDEYDSQREMNASGELRRTKSDFDNHTHYRNSSKEELEAESLSEIEECFLKQLDDSTPKELPEEPADYLQEYPNSKSCCGYNVEPDVLITDSKSANFCLSSDREKLKADTAIPLQGWRDTEEVEMIDKFTDSVSPVSLLASS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00802 483 CDD CRIB 68 108 - -
Car04g00802 483 ProSiteProfiles Rho GTPase-activating proteins domain profile. 118 296 IPR000198 GO:0007165
Car04g00802 483 MobiDBLite consensus disorder prediction 296 380 - -
Car04g00802 483 Gene3D CRIB domain 66 102 IPR036936 -
Car04g00802 483 Gene3D Rho GTPase activation protein 103 298 IPR008936 GO:0007165
Car04g00802 483 MobiDBLite consensus disorder prediction 339 380 - -
Car04g00802 483 SMART RhoGAP_3 129 292 IPR000198 GO:0007165
Car04g00802 483 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 329 - -
Car04g00802 483 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 326 454 - -
Car04g00802 483 PANTHER MKIAA1688 PROTEIN 1 329 IPR044785 GO:0005096
Car04g00802 483 PANTHER MKIAA1688 PROTEIN 326 454 IPR044785 GO:0005096
Car04g00802 483 CDD RhoGAP 132 288 - -
Car04g00802 483 SUPERFAMILY GTPase activation domain, GAP 111 289 IPR008936 GO:0007165
Car04g00802 483 SMART PBD_5 70 104 IPR000095 -
Car04g00802 483 Pfam RhoGAP domain 132 266 IPR000198 GO:0007165
Car04g00802 483 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00802 Car-Chr4 7938211 7941537 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00802 - - mtr:MTR_1g089500 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00802 04 7938211 7941537 Car04g00802 04 7938211 7941537 ECH
Car03g02723 03 72877135 72880160 Car04g00802 04 7938211 7941537 PCT