LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car03g02723	ATGAGAGGACCAGTTATGGTGAGTGGATGCGGCGGTAGAAGAGGAAACAGAGACGCCGAAGAAGTGTCTCCGGCGGCATTAATGTTGGCTGCTTTGAAAAAATCAATGGTAGCTTGTAGTGTAGAGACTCCTGATGATGTAATCTCAACCGTTCATCATCCAATGGAGATTGGATGGCCAACAAATGTTAAGCATGTTAGTCATGTTACCTTTGATCGTTTTAATGGCTTTTTGGGTCTTCCTCTTGAGCTTGAACTTCATGTTCCTGCTCCTGTTCCAAGTGCTAGTGTTAGTGTGTTTGGTGTCTCAGCAGAATCAATGCAATGTTCGTATGATTCAAAAGGAAACAGCGTCCCCACAATTCTGCTACTAATGCAAGAGAGATTATACTCACAAGAAGGCCTAAAGGCTGAAGGAATATTTCGTATAAATCCAGAAAATGGTGAAGAGGAGCATTTGAGAGAACAATTGAATAGTGGCATTGTGCCAAATGACATTGATGTTCATTGTTTGGCTGGATTAATTAAAGCATGGTTTAGGGAACTTCCTTCAGGAGTGTTAGATGGACTTTCACCTGAACAAGTTCTTCAATGCAACACAGAAGAAGAATGTGTTGAGCTTGTGAAGGAGCTTAAACCAGTTGAATCAGCTTTGCTCAATTGGGCTATTGATCTCATGGCTGATGTTGTAGAAGAAGAGGAGTGTAATAAAATGGATGCTAGAAATATTGCTATGGTTTTTGCCCCAAATATGACTCAGATGTCTGATCCACTGACTGCCCTAATGCATGCTGTCCAAGTGATGAATTTGTTGAAAACACTGATATTGAAGACACTTCGAGATCGCGAAGAAACAGCATCAGCAGATTATTCACCAATGTCATCTCATTCATCAGACCAACAATCAGAAGATGACTATAACAGTCAACAAGAAATGAATACAAGTGGTGAATTGAGAAGAACCAAGTTAGATTTTGATGATCATGTTGAATACAACCACAACATTGAAGAAGAATTAGAGAGTCCTAGGAGTTGCTCTAACTATAATGTGGAATCTGTTTTATCATTTACTGATGCAAAAACTGAGAACTCGTGTTTGAGTTCGGCTTATGGAGACGAATCAGTGACAACTCTAACAGCCGAAGACAGATCAAATGGTGACGACACAAGTAGTCCATCGGTAGAAAGTAAAGACGACACTGATGTAGACATGGTAGATAAATTTACCACTGAATCTGTTTCAGTCATGCCTTTGTTTGAATCTAGTTAA	1269	0.3987	MRGPVMVSGCGGRRGNRDAEEVSPAALMLAALKKSMVACSVETPDDVISTVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELELHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQEGLKAEGIFRINPENGEEEHLREQLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEECVELVKELKPVESALLNWAIDLMADVVEEEECNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRDREETASADYSPMSSHSSDQQSEDDYNSQQEMNTSGELRRTKLDFDDHVEYNHNIEEELESPRSCSNYNVESVLSFTDAKTENSCLSSAYGDESVTTLTAEDRSNGDDTSSPSVESKDDTDVDMVDKFTTESVSVMPLFESS	422

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car03g02723	422	MobiDBLite	consensus disorder prediction	285	323	-	-
	Car03g02723	422	CDD	RhoGAP	119	269	-	-
	Car03g02723	422	SMART	RhoGAP_3	116	279	IPR000198	GO:0007165
	Car03g02723	422	CDD	CRIB	55	85	-	-
	Car03g02723	422	Pfam	P21-Rho-binding domain	56	83	IPR000095	-
	Car03g02723	422	SMART	PBD_5	57	91	IPR000095	-
	Car03g02723	422	ProSiteProfiles	CRIB domain profile.	57	70	IPR000095	-
	Car03g02723	422	SUPERFAMILY	GTPase activation domain, GAP	98	276	IPR008936	GO:0007165
	Car03g02723	422	Pfam	RhoGAP domain	119	253	IPR000198	GO:0007165
	Car03g02723	422	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	102	283	IPR000198	GO:0007165
	Car03g02723	422	Gene3D	CRIB domain	52	86	IPR036936	-
	Car03g02723	422	PANTHER	RHO GTPASE ACTIVATION PROTEIN-RELATED	335	393	-	-
	Car03g02723	422	PANTHER	RHO GTPASE ACTIVATION PROTEIN-RELATED	1	336	-	-
	Car03g02723	422	MobiDBLite	consensus disorder prediction	369	405	-	-
	Car03g02723	422	Gene3D	Rho GTPase activation protein	89	281	IPR008936	GO:0007165
	Car03g02723	422	MobiDBLite	consensus disorder prediction	288	316	-	-
	Car03g02723	422	MobiDBLite	consensus disorder prediction	369	391	-	-
	Car03g02723	422	PANTHER	MKIAA1688 PROTEIN	335	393	IPR044785	GO:0005096
	Car03g02723	422	PANTHER	MKIAA1688 PROTEIN	1	336	IPR044785	GO:0005096

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car03g02723	Car-Chr3	72877135	72880160	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car03g02723	-		K20642	gmx:100812700	591.267

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car03g02723	03	72877135	72880160	Car04g00802	04	7938211	7941537	PCT