Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00790 ATGGGTGTTGTCACTGTAGGAGAATTTAAGCCTAGCATTTCAGGGAAGAGGACCTTTCGTCCTAGCTCAAGCATAAGGCATGCCACTGAATGGCCAATATCTGATGTCTCTAGTGATCTTACCATCGAAATAGGAGCTACAAGTTTTGCACTTCACAAGTTTCCTCTAGTTTCTAGGAGTGGAAGAATAAGGAAACTATTGTTAGAAGCAAAAGATTCTAAAGTTTCACGCATAAGTCTCCCAAGTGTAGCAGGTGGTGCAGAGGCATTTGAGCTAGCTGCAAAATTTTGTTATGGAATTAATATTGAATTCACTCTCTCCAATGTTGCTATGCTAAGATGTGTTGCTCAATTTCTAGAAATGACAGAAGATTTTGCTGAGAAAAACTTGTTGATAAGAGCTGAATCATATCTAAAAGAGACAGTGCTTCTAAACACTTCAAGCGCAATATCGGTTCTTCACCGTTGCGAAACTCTACTACCTTTTGCAGAAGAGATTAATCTTGTTAGCAGACTAATCAATTCAATTGCAAACAATGTGTGCAAAGAGCAACTTACTTCTGGTTTGCAGAAACTAGACCATAATTTCCCTTCTAAAACCATGGAACCTGAAACACCCTCAGAATGGTGGGGAAAATCTCTTAGTGTTCTTAATCTTGATTTCTTCAAAAGAGTTTTATCTGCTACCAAATCAAAGGGACTAAAACAAGACATTATCAGCAAAATTTTGATAAATTATGCACATAATTCTCTTCAAGGGATGATTGTTAGGGACCCTCAAGTAATGAAAGGAAGTTTACTTGACTTAGAATTGTTGAAGAAACAAAGAGTCATTGTTGAAACCATAACTAGTTTACTACCAACTCAATCAAGGAAAAGTCAAGTTCCAATAGCATTTCTCTCAAGTTTGTTGAAAGCTTCAATAGCAGCATCAGCATCTACTTCTTGTAGATCTGATTTGGAGAGGAGGATTGGTCTACAACTTGACCAGGCAATTCTTGAAGACATTTTGATACCAACAAGTTCATATCAAAATAACCATAATAGTACTATTTATGATACAGATTCAATTGTGAGAATTTTTTCCATTTTTCTTAACTTAGATGAAGTGGATGAGGAGGATAGCAGGTTGAGAGATGAAAGTGAAATGGTTTATGAGTTTGACAGCCCTGGATCTCCAAAACAAAGCTCAATTCTTAAGGTATCCAAATTGCTTGACAACTATCTTGCTGAAGTAGCACTAGACCCAAACTTGTTGCCATCAAAGTTCATTTCACTTGCTGAATTGCTTCCAGATCATGCACGTATTGTAAGTGATGGACTCTACAGAGCAAATGATATCTTCCTTAAGGTTCATCCAAACATAAAGGACTCAGAGAGGTACCGGCTATGCAAAACCATTGATTGCCAAAAACTGTCACAAGAAGCATGCAGCCATGCAGCACAAAATGAGAGGCTACCAGTTCAAATGGCAGTACAAGTACTTTACTTTGAGCAAATAAGGCTTAGAAATGCTATGAATGGAGGACACAATCATTTATTGTTTGGGGGTGGTGGTGGACTTAATGGTCAATTCCCTCAACGTTCAGGTAGTGGTGCAGGAAGTGGAGCAATTTCACCTAGAGATAACTATGCATCAGTTAGAAGGGAGAACCGAGAGCTTAAACTTGAAGTTACAAGAATGAGAATGAGACTCACTGATTTGGAAAAAGATCATGTTTCTATGAAACAAGAGCTTGTAAAGTCTCATCCTGCTAACAAGATCTTTAAATCATTCACCAAAAAACTAAGCAAGCTCAATGCATTGTTTAAGATGAATGGTATTAAGCTAAATGGTGTTAGTTCCGAGAGTCGGTTCCCTTTTCCAAAGAGAAGGCGTCACTCAGTTTCTTGA 1893 0.3788 MGVVTVGEFKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEIGATSFALHKFPLVSRSGRIRKLLLEAKDSKVSRISLPSVAGGAEAFELAAKFCYGINIEFTLSNVAMLRCVAQFLEMTEDFAEKNLLIRAESYLKETVLLNTSSAISVLHRCETLLPFAEEINLVSRLINSIANNVCKEQLTSGLQKLDHNFPSKTMEPETPSEWWGKSLSVLNLDFFKRVLSATKSKGLKQDIISKILINYAHNSLQGMIVRDPQVMKGSLLDLELLKKQRVIVETITSLLPTQSRKSQVPIAFLSSLLKASIAASASTSCRSDLERRIGLQLDQAILEDILIPTSSYQNNHNSTIYDTDSIVRIFSIFLNLDEVDEEDSRLRDESEMVYEFDSPGSPKQSSILKVSKLLDNYLAEVALDPNLLPSKFISLAELLPDHARIVSDGLYRANDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNHLLFGGGGGLNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVTRMRMRLTDLEKDHVSMKQELVKSHPANKIFKSFTKKLSKLNALFKMNGIKLNGVSSESRFPFPKRRRHSVS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00790 630 SUPERFAMILY POZ domain 22 123 IPR011333 -
Car04g00790 630 PANTHER OS12G0117600 PROTEIN 25 623 IPR043454 -
Car04g00790 630 Pfam BTB/POZ domain 37 123 IPR000210 GO:0005515
Car04g00790 630 Pfam NPH3 family 208 477 IPR027356 -
Car04g00790 630 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 623 - -
Car04g00790 630 ProSiteProfiles NPH3 domain profile. 208 501 IPR027356 -
Car04g00790 630 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Car04g00790 630 Coils Coil 544 571 - -
Car04g00790 630 Gene3D Potassium Channel Kv1.1; Chain A 24 143 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00790 Car-Chr4 7819531 7823723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00790 1 451 EF-hand Containing Proteins AT2G47860 57.796 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00790 - - mtr:MTR_1g088885 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00790 04 7819531 7823723 Car04g00790 04 7819531 7823723 ECH
Car03g02743 03 72992772 72997128 Car04g00790 04 7819531 7823723 PCT