Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02743 ATGGGAGTTGTAACTCTTGGTGAATTGAAGCCTAGTGTTTCAGGGAAAAGGACTTTTCGTCCAAGTTCAAGCATAAGACATGCCACTGAATGGCCAATATCTGATGTCTCTAGTGATCTTACCATCCAAGTAGTAGCATCAACCTTTGCACTTCACAAGTTTCCTCTTATATCTAGGAGTGGAAGATTTAGAAAGCTGCTGTTAGAATCAAAAGTTTCACGCATAAGTCTTCCAAATGTGCCAGGTGGTGTAGAGGCATTTGAATTAGCTGCAAAATTCTGCTATGGAATCAACATTGATTTCACTCTCTCAAATGTTGCTATGCTACATTGCACATCTCATTTTCTTGAAATGACAGAAGAATTCTCAGAGAAGAATTTGTTGACAAGAGCTGAATCATATCTAAAGGAAACAGTACTCCCCAACACATCAAACACTATACATGTTCTTCACCATTGTGAGAATCTTTTACCTTTATCAGAAGAAATAAACCTTGTTAATAAGCTTATCAATGCGATTGCGAATAATGCATGCAAAGAGCAACTTACTTCTGGTTTGTTAAAACTTGACCACACTTTTCCTTCTCAAAAAAACACATCAATAGTAATGGAACAAGAAACACCTTTAGATTGGTGGGGGAACTCATTCAATGTTCTCAGTCTCGATTTCTTCGAACGAGTTATATCGGTTATGAAATCAAAGGGATTGAAACAAGACTTAATCAGCAAAATTTTGGTGAACTATGCACATAATTCTCTTCAAGGGACTAATGTTAGGGACCCTCTTGACATAGAATTGCAAAAGAATCAAAGGGTCATTGTTGAAACCATAGTTGGTTTACTTCCAAATCAATCAAGGAAAAGTCCAATTCCAATGGCATTTCTTTCATGTTTATTGAAAACTTCAATAGCAACATCAGCATCAAATTCTTGTAAAGGTGATTTGGAAAAGCGAATCGGTCTACAACTTGATCAGGCAATTCTCGAAGACATTCTCATTCCAACAAATTCATCAACTTCAAATACTCATCACAACACAATGTATGATACAGATTCAGTTTTGAGGATTTTTTCTACTTTTCTAAACTTGgaagatgtggatgatgatgaagatagtgattttagagatgaaaaccaaatgatgtatgagtatgaaTTTGACAGTCCTGGATCTCCAAAACAAAGCTCAATTCTGAAAGTttccaaattacttgacaattatcttgctgaagttgcactagactcaaaccttttgccatcaaaattcatagcacttgctgaactattaccggaccatgcacgcatttcaagtgatggactctatagagctgttgatatCTTCCTTAAGGTTCATCCTCACATTAAGGACTCAGAGCGATACCGTCTAAGCAAAACCATCGACTGTCAGAAACTATCTCAAGAAGCATGTAGCCATGCAGCACAAAATGAAAGACTACCAGTTCAAATAGGAGTACAGGTTCTTTTCTATGAACAAACAAGGCTTCGCAACGCGATGAACGGAGGACACAATCAAACAATCTTCTTCGGTGGAATTCACGGTCAATTCCCTCAAAGATCAGGAAGTGGTATAGGAAGTGGAGCAATTTCTCCTAGAGATAACTATGCATCAGTAAGAAGAGAGAACAGAGAGCTGAAACTTGAAGTTGCAAGAATGAGAATGAGATTGAATGATTTGGAGAAAGATCACGTTTCTATGAAACAGGAGCTTGTGAAGCCTCATATTGCTAACAAAATCTTCAAATCATTCACCAAAAAATTAAGTAAACTTAATGCTCTATTTCGTATTAACagtgttcgtggcagtggtactggtactggtactggtGAAAGATCTACTTCATCACAAATTCGGTTTCCTTTTCATAAGCGAAGGTGTCACTCAGTTTCATGA 1911 0.3239 MGVVTLGELKPSVSGKRTFRPSSSIRHATEWPISDVSSDLTIQVVASTFALHKFPLISRSGRFRKLLLESKVSRISLPNVPGGVEAFELAAKFCYGINIDFTLSNVAMLHCTSHFLEMTEEFSEKNLLTRAESYLKETVLPNTSNTIHVLHHCENLLPLSEEINLVNKLINAIANNACKEQLTSGLLKLDHTFPSQKNTSIVMEQETPLDWWGNSFNVLSLDFFERVISVMKSKGLKQDLISKILVNYAHNSLQGTNVRDPLDIELQKNQRVIVETIVGLLPNQSRKSPIPMAFLSCLLKTSIATSASNSCKGDLEKRIGLQLDQAILEDILIPTNSSTSNTHHNTMYDTDSVLRIFSTFLNLEDVDDDEDSDFRDENQMMYEYEFDSPGSPKQSSILKVSKLLDNYLAEVALDSNLLPSKFIALAELLPDHARISSDGLYRAVDIFLKVHPHIKDSERYRLSKTIDCQKLSQEACSHAAQNERLPVQIGVQVLFYEQTRLRNAMNGGHNQTIFFGGIHGQFPQRSGSGIGSGAISPRDNYASVRRENRELKLEVARMRMRLNDLEKDHVSMKQELVKPHIANKIFKSFTKKLSKLNALFRINSVRGSGTGTGTGERSTSSQIRFPFHKRRCHSVS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02743 636 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 606 - -
Car03g02743 636 ProSiteProfiles BTB domain profile. 38 103 IPR000210 GO:0005515
Car03g02743 636 Pfam NPH3 family 210 476 IPR027356 -
Car03g02743 636 Pfam BTB/POZ domain 37 119 IPR000210 GO:0005515
Car03g02743 636 ProSiteProfiles NPH3 domain profile. 210 500 IPR027356 -
Car03g02743 636 PANTHER OS12G0117600 PROTEIN 25 606 IPR043454 -
Car03g02743 636 Coils Coil 541 575 - -
Car03g02743 636 Gene3D Potassium Channel Kv1.1; Chain A 23 132 IPR011333 -
Car03g02743 636 SUPERFAMILY POZ domain 22 120 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02743 Car-Chr3 72992772 72997128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02743 1 450 EF-hand Containing Proteins AT2G47860 58.004 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02743 - - gmx:100776688 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02743 03 72992772 72997128 Car04g00790 04 7819531 7823723 PCT