Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00628 ATGCTATGCCATGTCTTTAAAACACTACTCCTGTATCAATCCCCTGAAATTTCTACCTTCCAATTACACACACTCAAAATGGCCAAGGAAAATTCTATATGCCTCTTGTTTCTCTCTTCTCTCTTAATTTCATGTTCTGGAGGATCTCTGGTGGGTTTTTCCTATCATGAAAGAGGAGACACTTGGAAAGTTTCTTCATCTCAGAGTCGAGTTTTCGTCACAGATCATAGGATTTTGAGCACTCTCATCACCAACTCAAACATGTTAGTTGATCTCTACTTAAACAGAAGCCAAGTTGAAAATTTCATTACTTCAAAACCTTCAGCGATTTCGGAGCTTAAAGCTCAACTAGTGAACTTTCTTCCACATGTAAACATCAAAAGCATCACTGCTAGCTGTGGAAGTGAGTGCTTAGTTCAAAATGAGGTACCTTTAATCATGCATGCTCTTAAATCAATTCATAAAATTCTCAGCGATCTTCGCATCGATAGGGAAGTAAAAGTCTCAGTAGCATTTCCACTTCAATTCTTAAGGAAGTTGAGTACATCACAGAAACACGAAATTCGTAAGCTACTTTCATTTATTAAGAAAACGAAATCGTTTGTGCTGATAGAAGACAACATTGAAGGAGAATTAAGCATGGGAGATCATTTTGTTCAAACTATTATCAAAAGCGCCGCTCTTGCTGCTTCTGTTCTTCCTTGCAAAGATGTTCCTGTGATTCTAACAATCAAAAGCTCAATTATCACAAGTTCAATAGAAGCAGCTCAATTTAGTAAAAGGGTATCCAAGTATTTAGAATCAAGAAGTTCTGTTGCAAAAAGAATAGCTGCATTATATGTAGAACTGCATACAACAGAAGATTTTTCATGGAAAGAGCTCAAAAGGGAAAAAGAAGAAGTTTTTGCATCCTCTCGACGAGAGATCTTAAGCGAATTCATCAGAAGAAAAACTCTAGATAACACAAACAGTCCAACAAACACAGTTTATCCTCCTACTAATCCAACACCAGTTATCACACCCTCAGATACACCAACCATTATAGCAGTTCCTTCAGCAAATCCTGTCACAATTTCTCCTACCAATCCAGCTGCAATGCCAGTAACAGTTCCTTCAACCACACCTGTTCCATTACCACCAATAAATCCACCTAATTCACCAGTACCAGTGTTCAATCCAGCTACAACAGTTCCAGGTACACAACCAGTAACAAACCCTGTGACATCTTATTATCCACCTCCATCAGGTAATGTTCCTGTCATAAACCCTCAACAACCACCTGCTTCAAACACAAATGCTCCTTCTATTCAAGGGCAGAGTTGGTGTGTGGCGAAGTCCGGTGCTCCACAAGCTTCCATTCAATCAGCATTGGATTATGCTTGTGGAATGGGTGGGGCTGACTGTTCTCAGATACAGCAGGGTGGGAGTTGTTACAGTCCAGTCACTTTGCAGAACCATGCTTCTTTTGCTTTCAACAGTTACTATCAAAAGAATCCAGCTCCAACAAGTTGCGACTTTGGAGGCGCCGCAACCTTAGTTAACACAAATCCAAGTGTTGGTTCTTGCATTTTCCCATCATCGTCGTCGTCCTCAACACCAATGATATCATCACCAACACCACCTACACAATCAAGTCCAACATCAATACCACCACCAAGTCCAACAACACTATCACCATCTATTCCAACAACAGCTCCACCATCAATTCCAACAGCTCCACCAACATCATCTTCAGGATCAGGAACAGGCACTTTCGGCTATGGTGCCCCACCTTCAGTGTTAAATTCAAGCAGCCCAGGATCAGGTACAATGCCTGATTTTGGATCCGATAGCCCTCCCGTTGTGAACACAACCTCTGCCTCACACACTCTGAAACCTTTTACTGGCTGCATAGTTCTTATGATTCCATTTGTCACTGCAAGACTCAGCATGCGCCGATAG 1941 0.4122 MLCHVFKTLLLYQSPEISTFQLHTLKMAKENSICLLFLSSLLISCSGGSLVGFSYHERGDTWKVSSSQSRVFVTDHRILSTLITNSNMLVDLYLNRSQVENFITSKPSAISELKAQLVNFLPHVNIKSITASCGSECLVQNEVPLIMHALKSIHKILSDLRIDREVKVSVAFPLQFLRKLSTSQKHEIRKLLSFIKKTKSFVLIEDNIEGELSMGDHFVQTIIKSAALAASVLPCKDVPVILTIKSSIITSSIEAAQFSKRVSKYLESRSSVAKRIAALYVELHTTEDFSWKELKREKEEVFASSRREILSEFIRRKTLDNTNSPTNTVYPPTNPTPVITPSDTPTIIAVPSANPVTISPTNPAAMPVTVPSTTPVPLPPINPPNSPVPVFNPATTVPGTQPVTNPVTSYYPPPSGNVPVINPQQPPASNTNAPSIQGQSWCVAKSGAPQASIQSALDYACGMGGADCSQIQQGGSCYSPVTLQNHASFAFNSYYQKNPAPTSCDFGGAATLVNTNPSVGSCIFPSSSSSSTPMISSPTPPTQSSPTSIPPPSPTTLSPSIPTTAPPSIPTAPPTSSSGSGTGTFGYGAPPSVLNSSSPGSGTMPDFGSDSPPVVNTTSASHTLKPFTGCIVLMIPFVTARLSMRR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00628 646 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 159 612 - -
Car04g00628 646 MobiDBLite consensus disorder prediction 528 618 - -
Car04g00628 646 MobiDBLite consensus disorder prediction 539 573 - -
Car04g00628 646 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 159 612 IPR044965 GO:0004553|GO:0005975
Car04g00628 646 Gene3D - 435 534 - -
Car04g00628 646 Pfam X8 domain 441 511 IPR012946 -
Car04g00628 646 SMART X8_cls 440 524 IPR012946 -
Car04g00628 646 Gene3D Glycosidases 62 207 - -
Car04g00628 646 PRINTS Proline rich extensin signature 329 345 - -
Car04g00628 646 PRINTS Proline rich extensin signature 368 380 - -
Car04g00628 646 PRINTS Proline rich extensin signature 382 403 - -
Car04g00628 646 PRINTS Proline rich extensin signature 412 428 - -
Car04g00628 646 PRINTS Proline rich extensin signature 529 554 - -
Car04g00628 646 MobiDBLite consensus disorder prediction 574 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00628 Car-Chr4 6225989 6228701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00628 415 527 Glycoside Hydrolase AT2G05790 52.137 1.43e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00628 - - cam:101499863 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02890 03 74205936 74208921 Car04g00628 04 6225989 6228701 PCT