Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02890 ATGGCCAAGAAAGTTTCTCTATGCCTCCTGTTCCTCTCTTTTCTCATTTTCTTCTGTTCAGCAGGAAACAATGCATTTTCAACTTCTGTTGGAACCAAATTTCACCACAAAAACAGGATCTCAAAATCTCAGATTTGGTATTTGGTAACAGATCACACAAATCATCAAACCATAGTACAAAACAGAAGAGTTCTACAAGATATAaacaactcaccaacaacaacaaatccagcatcagtaacaccatcaacaataactccaccagacacaccaacCATAATCACAGTTCCTTCAGCAAATCCTGTCACAGTTTCTCCAACAAATCCAACACCACTACCTGTTACAAATCCAGTTACAGCTACTCCTATTACAGTTCCAGGTACACAGCAACCTGTGAATTCTTATCCACCTCCATCACCACCATCATCAGGAACTGTTCCTGTCACAAATCCTCAGTTTCAGCCTCCACCTTCAAACTCAAATTCTCAATCTCAAGGTAGTTGGTGTGTGGCTAAAACTGGAATTCCACAAACAACACTTCAAACAGCATTGGACTATGCTTGTGGAACAAAGAGTGTAGATTGTTCACAAATACAACAAGGTGGAAACTGTTACAATCCAAACTCACTTCAAAACCATGCTTCTTTTGCATTCAATAGTTACTACATAAAGAATCCTGCTTCAACTAGCTGTGACTTTGGAGGGGTTGCTACAATTGTTACCACTAACCCTAGTTCCGGTACTTGCATCTATCCACCATCTTCAGGAGGAGCAGGCACATCTGGCTCTGGCACTACATCACCTTCAACAGGTTTTGGGCCTCAAAGCTCTCCATTGGATTCCTCTCATTCAACTGGCCTTAGACCTTTCCTAGGCTGCATGATTATGATGACATTATTGGTCAGTGGAAGACTTGTTATATGA 924 0.3777 MAKKVSLCLLFLSFLIFFCSAGNNAFSTSVGTKFHHKNRISKSQIWYLVTDHTNHQTIVQNRRVLQDINNSPTTTNPASVTPSTITPPDTPTIITVPSANPVTVSPTNPTPLPVTNPVTATPITVPGTQQPVNSYPPPSPPSSGTVPVTNPQFQPPPSNSNSQSQGSWCVAKTGIPQTTLQTALDYACGTKSVDCSQIQQGGNCYNPNSLQNHASFAFNSYYIKNPASTSCDFGGVATIVTTNPSSGTCIYPPSSGGAGTSGSGTTSPSTGFGPQSSPLDSSHSTGLRPFLGCMIMMTLLVSGRLVI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02890 307 Gene3D - 161 252 - -
Car03g02890 307 SMART X8_cls 167 251 IPR012946 -
Car03g02890 307 MobiDBLite consensus disorder prediction 131 154 - -
Car03g02890 307 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 49 280 IPR044965 GO:0004553|GO:0005975
Car03g02890 307 MobiDBLite consensus disorder prediction 98 167 - -
Car03g02890 307 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 49 280 - -
Car03g02890 307 Pfam X8 domain 168 238 IPR012946 -
Car03g02890 307 MobiDBLite consensus disorder prediction 253 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02890 Car-Chr3 74205936 74208921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02890 104 252 Glycoside Hydrolase AT2G05790 38.961 2.06e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02890 - - gmx:100789503 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02890 03 74205936 74208921 Car03g02890 03 74205936 74208921 ECH
Car03g02890 03 74205936 74208921 Car04g00628 04 6225989 6228701 PCT