Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00620 ATGGCTCCTGATATAGCAACTGCTGCAGCCAACATCAATGACGCTCAAGCTAAGGCTTCAAAACGCGCCTTTGTTACCTTCCTTGCCGGAAACGGAGACTACGTCAAAGGTGTTGTTGGTTTAGTCAAAGGTCTTCGTAAAGTCAAAACCATTTACCCTCTAGTGGTTGCAGTGTTACCTGATGTTCCTCAGGAGCACCGGAATATTTTAACTTCTCAAGGTTGTATTGTTAGAGAGATTCAACCTGTTTACCCTCCTGAGAATCAGACTCAGTTTGCTATGGCTTATTATGTCATCAACTACTCCAAGCTTCGTATTTGGGCTTTTGAGGAATATGACAAGATGATTTACCTTGACGGTGACATACAAGTATTTGAAAACATTGACCATTTATTTGACCTCCCTAATGACTATTTCTACGCGGTGATGGATTGTTTTTGTGAGGCTACTTGGGGACACACCAAGCAGTATGAAATCGGTTACTGTCAGCAGTGTCCTGATAAGGTTCAATGGCCCACTAATTTTGGTGCCAAGCCTCCACTCTACTTCAACGCTGGTTTTTTTGTTTATGAACCTAATATGGCTACTTACCATGATCTTCTTCAAAAACTTAAACTCACAAAGCCAACTTCCTTTGCTGAACAGGATTATTTGAACATGTACTTCAAGGACAAGTATAAGCCTATACCAAATATTTACAATCTTGTGCTGGCTATGCTCTGGCGTCACCCTGAGAATGTTGAACTTGAGAAAGTCAAAGTGGTTCATTACTGTGCCGCTGGGTCTAAGCCATGGAGGTACACAGGGGTGGAGGAGAATATGGAAAGAGAAGATATAAAGATGTTGGTGAAGAAATGGTGGGATATATATGAAGACGAGAGTTTGGATTACAAGGAACCCGTGAATGCGAATCGCTTAACATCAGCACTTTTGGAAGCTCCTGGTATCAACTTTGTTCCAGCTCCATCAGCCGCTTGA 978 0.4223 MAPDIATAAANINDAQAKASKRAFVTFLAGNGDYVKGVVGLVKGLRKVKTIYPLVVAVLPDVPQEHRNILTSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWAFEEYDKMIYLDGDIQVFENIDHLFDLPNDYFYAVMDCFCEATWGHTKQYEIGYCQQCPDKVQWPTNFGAKPPLYFNAGFFVYEPNMATYHDLLQKLKLTKPTSFAEQDYLNMYFKDKYKPIPNIYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGVEENMEREDIKMLVKKWWDIYEDESLDYKEPVNANRLTSALLEAPGINFVPAPSAA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00620 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 25 299 IPR029044 -
Car04g00620 325 Pfam Glycosyl transferase family 8 26 268 IPR002495 GO:0016757
Car04g00620 325 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 308 - -
Car04g00620 325 PANTHER GALACTINOL SYNTHASE 2 1 308 IPR030515 GO:0006012|GO:0047216
Car04g00620 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 19 298 IPR029044 -
Car04g00620 325 CDD GT8_Glycogenin 22 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00620 Car-Chr4 6164554 6166470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00620 1 325 Glycosyltransferase AT1G56600 71.343 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00620 K18819 - gmx:548050 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02901 03 74289114 74291149 Car04g00620 04 6164554 6166470 PCT