Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02901 ATGGCACCGGACATCACCACCGCCGCCGTGAATGCCACCGTGGAACAAACCAAGTTTGACGGTGGAAAAGGCCGTGCCTTTGTAACATTCCTTGCAGGAAACGGTGATTACATAAAGGGTGTTGTTGGTTTAGCAAAAGGGTTAAGAAAAACCAAAACAATTTACCCTTTAGTGGTTGCAATTTTACCTGATGTACCTGAAGAACACCGTAAGATTCTTGTGTCACAAGGTTGCATTGTTAAGGAGATTGTTCCTGTTTATCCTCCACCTAATCAAACTCAATTTGCTATGGCTTATTATGTCATTAATTACTCCAAACTACGTATTTTTGAGTTTGTGGAGTATAGCAAGATGATATACTTAGATGGTGATATCCAAGTTTTTGAAAACATTGACCATCTGTTTGATCTACCTGATGATTACTTCTATGGTGTGATGGACTGTTTTTGTGAGAAAACTTGGAGTCACACCCCTCAGTATAAAATTGGATACTGCCAACAATGTCCTGATAAGGTTCAATGGCCCTCTGATTTTGGTCCCAAACCTCCTCTCTATTTCAATGCTGGAATGTTCGTTTTTCACCCTCATGCTGCCACATACCATGACCTCCTTGAAAAAGTCAAAATTTCCAAACCAACCCCCTTTGCTGAGCAGGACTTTTTGAACATGTATTTCAAGGATAAATACAAGCCTATACCTAACGTGTACAACCTTGTGTTAGCCATGCTCTGGCGTCACCCTGAGAATGTTGAGCTAGACAAAGTTCAAGTTGTTCACTATTGTGCTGCTGGGTCTAAGCCATGGAGGTACACTGGGGAGGAACAGAACATGGAGAGAGAAGACATAAAGATGTTGGTTAAGAAATGGAAGGAGATATATGAGGATGAAACATTGGATTACAACAACAATGTTAGAGTGGAACGTTTTACAGCTGCACTATTGGAAGCTGGTGGTATTAAATCAATGCTTACCCCATCTGCAGCTTAA 987 0.4103 MAPDITTAAVNATVEQTKFDGGKGRAFVTFLAGNGDYIKGVVGLAKGLRKTKTIYPLVVAILPDVPEEHRKILVSQGCIVKEIVPVYPPPNQTQFAMAYYVINYSKLRIFEFVEYSKMIYLDGDIQVFENIDHLFDLPDDYFYGVMDCFCEKTWSHTPQYKIGYCQQCPDKVQWPSDFGPKPPLYFNAGMFVFHPHAATYHDLLEKVKISKPTPFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELDKVQVVHYCAAGSKPWRYTGEEQNMEREDIKMLVKKWKEIYEDETLDYNNNVRVERFTAALLEAGGIKSMLTPSAA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02901 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 303 IPR029044 -
Car03g02901 328 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Car03g02901 328 CDD GT8_Glycogenin 25 295 - -
Car03g02901 328 PANTHER GALACTINOL SYNTHASE 2 1 326 IPR030515 GO:0006012|GO:0047216
Car03g02901 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 28 297 IPR029044 -
Car03g02901 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02901 Car-Chr3 74289114 74291149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02901 1 328 Glycosyltransferase AT1G56600 73.373 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02901 K18819 - gmx:100800249 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02901 03 74289114 74291149 Car03g02901 03 74289114 74291149 ECH
Car03g02901 03 74289114 74291149 Car04g00620 04 6164554 6166470 PCT