Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00195 ATGGATCTCACTAAAGTCACACTAGAGATCTTCTCCAAACTTGAACACAAATGGCTTTCTCATTGTAAAGACACCAACAAAACACGCATTCTCAGCATTGACGGCGGTGGAACCACCGCCATTGTTGCCGGAGCTTCGTTAATCAATCTCGAGGATCAGATCCGTCAACAGACCTCCGATCCTCACGCTCAGGTAGCAGATTTCTTCGACATTGTTGCCGGTACCGGCATTGGCGCTATTCTTGCAGCAATGATCACCGCCGCCGATGCCTTCGGTAGACCTCTTTACACTGCAAAAGAAGCTGTACGTATCGTTACCGAGAGAAACTCCGAACTCTATAAACTCAAATCCGCCGGAGTATTTcgccggcgccgtagattctcttcgaggaacatggataaCGTGTTGAAGGAAGTGTTCGTTAAAAAAGAAGATGGAAGTTTGTTGACTTTAAAGGACACGTGTAAACCGTTGCTTATACCTTGCTTTGACCTCAAGAGTTCGGCTCCATTCGTTTTTTCTCGAGCCGATGCGTCCGAATCTCCGAGCTTCAACTTCGAACTATGGAAAGTATGCCGCGCCACATCAGCTACGCCGAGTCATTTCAAGCCGTTTAACTTCACTTCTGTCGACGGCAAAACTTCTTGCTCCGCCGTGGACGGTGGTCTGGTAATGAACAATCCTACAGCCGCGGCGGTCACGCATGTTCTCCATAACAAGCGCGATTTCCCATCGGTAAACGGCGTGGAGGATCTTTTGGTCCTTTCCTTGGGAAACGGATCGTCGAACTCGAAAACGTGCGTGAGCCGCACGTGCTCAACGCCGTCGGTAGTTGACATTGTTCTTGACGGCGTTTCCGAGACCATTGACCAAATGTTAGGAAACGCATTCTGTTGGAACCGTACGGATTACGTCAGAATTCAGGCGTTTGGTTTGGGAAACGAAGCAGTGAGGAAAAATGGAGTGACAGAAGAGGAAGTGCTGAAAGAGAGAGGACTTGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAACGGAAACAGAATCGATAGCTTTGTGCAACGTCTTGTTGCTACCGGGAAACCTAGCCCACCGTTTAGTCCTTGCAAGGATTCCACCGTTAAACCTCTCGCTAACGGCCGCTAG 1155 0.4762 MDLTKVTLEIFSKLEHKWLSHCKDTNKTRILSIDGGGTTAIVAGASLINLEDQIRQQTSDPHAQVADFFDIVAGTGIGAILAAMITAADAFGRPLYTAKEAVRIVTERNSELYKLKSAGVFRRRRRFSSRNMDNVLKEVFVKKEDGSLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATSATPSHFKPFNFTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSSNSKTCVSRTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGNEAVRKNGVTEEEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVATGKPSPPFSPCKDSTVKPLANGR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00195 384 MobiDBLite consensus disorder prediction 364 384 - -
Car04g00195 384 SUPERFAMILY FabD/lysophospholipase-like 26 312 IPR016035 -
Car04g00195 384 Gene3D Cytosolic phospholipase A2 catalytic domain 16 365 - -
Car04g00195 384 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 384 - -
Car04g00195 384 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Car04g00195 384 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Car04g00195 384 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Car04g00195 384 PANTHER PATATIN-LIKE PROTEIN 6 1 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00195 Car-Chr4 2006074 2007946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00195 1 384 Acyl Lipid Metabolism Gene Families AT3G63200 69.744 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00195 - - gmx:100777557 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00195 04 2006074 2007946 Car04g00195 04 2006074 2007946 ECH
Car03g02250 03 68511015 68512688 Car04g00195 04 2006074 2007946 PCT