Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02250 ATGGAACTTAGCAAAGTGACGCTGGAGATCTTTAACAAACTTGAACAACAATGGCTCTCAGTATCACACTGTGGAGCCACCACCAAAACTCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTTTCCGGCGCCGCTCTCATCCATCTTGAGGACCAGATCCGCGCACAAACCAACGATCCTCACGCTCAAATCACCGACTACTTCGACATCATCGCCGGGACTGGCATTGGCGGAATACTCGCTGCTATGATCACCGCCGACGATGGCTTCGGCAGACCTCTCTTCACTGCCAGAGACGCCGTCAACTTCATCGCCGACAGAAATCACGAACTCTACAAAACGAACACAGTCGGAGTTTTTCGCCGGCGCAGGAGATTCTCCTCGAGTAGCGTTGAAAGTTTGTTGAAGCGAACGTTTCAAAGAAAAGAGAACGAAGGAAAGTCGTTGACGTTGAAGGACACGTGTAAGCCTTTGCTTATCCCTTGCTACGACCTCAAGAGTTCCGCTCCGTTCGTGTTCTCACGAGCCGACGCGTCCGAGTCACCGAGTTTCAATTTCGAACTCTGGAAGGTTTGTCGCGCCACGTCAGCAATTCCAAGACTCTTCAAACCTTTTCAATTCGCTTCCGTCGACGGAAAGACCTCTTGCTCAGCCGTGGACGGCGGTCTGGTGATGAATAATCCGGCGGCAGCGGCTGTCACGCATGTTCTCCATAACAAACGTGATTTCCCGTCGGTGAATGGCGTGGAGGATCTAATGGTGATGTCAATCGGAAACGGAGCGCCGGCGAACAGAGTTTGTGACGTTCGTGAGTGTTCAACGTCGACGGTGGTTGACATTGCTCTCGACGGCGTTTCGGAAACCATTGACCAGATGTTGGGAAACGCCTTCAGTTGGAATCGTACTGACTACGTCAGGATTCAGGCTTTTGGTTTGGGAGAAAAGGGAAGGTGGGAAGAAATGGAAGTGCTGAACGAGAGAGTGTTGGAGTCGTTGCCATTTGGGGGGAAACGGTTACTACAAGAAACTAACGGTAACAGAATTGAGAGCTTTGTGAAACGTCTTGTTGCTACCGGAAAGTCTAGTTTGCCACCTAGTCCTTGCAAGGTTCCGCCGTTAGCCACTTGCTAA 1140 0.5132 MELSKVTLEIFNKLEQQWLSVSHCGATTKTRILSIDGGGTTAIVSGAALIHLEDQIRAQTNDPHAQITDYFDIIAGTGIGGILAAMITADDGFGRPLFTARDAVNFIADRNHELYKTNTVGVFRRRRRFSSSSVESLLKRTFQRKENEGKSLTLKDTCKPLLIPCYDLKSSAPFVFSRADASESPSFNFELWKVCRATSAIPRLFKPFQFASVDGKTSCSAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLMVMSIGNGAPANRVCDVRECSTSTVVDIALDGVSETIDQMLGNAFSWNRTDYVRIQAFGLGEKGRWEEMEVLNERVLESLPFGGKRLLQETNGNRIESFVKRLVATGKSSLPPSPCKVPPLATC 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02250 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 33 236 IPR002641 GO:0006629
Car03g02250 379 PANTHER PATATIN 2 375 - -
Car03g02250 379 PANTHER PATATIN-LIKE PROTEIN 6 2 375 - -
Car03g02250 379 SUPERFAMILY FabD/lysophospholipase-like 29 318 IPR016035 -
Car03g02250 379 Pfam Patatin-like phospholipase 33 235 IPR002641 GO:0006629
Car03g02250 379 Gene3D Cytosolic phospholipase A2 catalytic domain 23 366 - -
Car03g02250 379 CDD Pat17_PNPLA8_PNPLA9_like 32 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02250 Car-Chr3 68511015 68512688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02250 1 377 Acyl Lipid Metabolism Gene Families AT3G63200 68.653 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02250 - - gmx:100806989 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02250 03 68511015 68512688 Car03g02250 03 68511015 68512688 ECH
Car03g02250 03 68511015 68512688 Car04g00195 04 2006074 2007946 PCT