Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00170 ATGGAACCAAAGTTCACAATCAATTGTCCCAGAAATGAGTTCCTTCCAACACCAACCAATGGAACTCGTTTACCAGAGAGTCCAAGAATACCAATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTGCATTTGAGGTTTCTAAAGCCTTATCACCTCAACCACCACCTCCTTCTTCTTGCTTACCTTCTAAACCTTCTACTAACTCCATTCCTGAAGAAACTACTAACCTCTCTAAAGAATTCTCAACCATGTGTGGAAATCAATTCTCTTTTGCTTCCTCTGCTACTTCTCAGCTTGTCCTTGAACGCATCATGTCACAGTCCACAAGAGAGGAAGTATCTCCATTAACATCAGGTAGATTGTCTCATAGCAGTGAACCCTTGAATGGTGGTGGTTCTTTAACAGGAACAGATAGTCCACCAATTTCTCCTTCTGATGAGTATGATGATGTTGTTAAGTTTTTTCGTGCAAACAATTCAATACACCCTTTATTCAATGGTGGAAGAGCCAAGATGAGTAATAGTAGTGGTATTGGCAGTGCCACTCCAAGCTCAGGAGCTAAAAcagtaggaagatggctaaaagacagaagagaaaaaaagaaagaagaaaacagaagccataatgctcaactgcatgctgctatttgtgtagctgctgttgcctctgcagttgcagccatcactgcagcaacagctgctgcatctaacaacaaggatgatgagaagatggctaagactgacatggctgttgcttctgcagctacacttgttgctgctcagtgtgttgaggctgctgaagcaatgggagctgagagagatcaccttgcttctgttgttacttctgctgtcaatgttcgctctcatgatgatatcactactctaactgctgcagctgccacaGCTCTAAGAGGTGCAGCAACATTGAAAGCAAGAGCATTAAAAGAGATGTGGAATATTACTGCAGTGACACCACTAGAAAAAAGCATAGGGATTGGAATATGTGGTAAAGGAAATAACAGTAGTTCTAGCACTAGTGATAGTGGAGAGATTATCAATGCAGAAAATTTCCTGAGTGTATGCAGCCAAGAACTCCTTGCTAGAGGAAGTGAATTACTCAAACGGACCCGAAAAGGTGATCTTCACTGGAAAATAGTTTCTGTTTATATACATAGAACAGGCCAGGTGATGCTGAAAATGAAAAGCAAACATGTCGCAGGAACCATTACCAAAAAGAAAAAGAATATTGTGTTAGATGTGTGCACAAATTTAGCAGCATGGCCAGGAAGACATCTTTTAGATGATGGTGAAAAAAGAAAGTATTTTGGATTGAAGACAGAATCAAGAGGAATAGTTGAGTTTGAATGTAGAAACCAAAGAGAATATGAATTGTGGACAAGAGGGGTTTCAAGACTTCTTTCCATTGTTTCACAGAGGAAAAACAGAAATGGGATATAA 1458 0.3025 MEPKFTINCPRNEFLPTPTNGTRLPESPRIPMEFLSRSWSASAFEVSKALSPQPPPPSSCLPSKPSTNSIPEETTNLSKEFSTMCGNQFSFASSATSQLVLERIMSQSTREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEYDDVVKFFRANNSIHPLFNGGRAKMSNSSGIGSATPSSGAKTVGRWLKDRREKKKEENRSHNAQLHAAICVAAVASAVAAITAATAAASNNKDDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVTSAVNVRSHDDITTLTAAAATALRGAATLKARALKEMWNITAVTPLEKSIGIGICGKGNNSSSSTSDSGEIINAENFLSVCSQELLARGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSKHVAGTITKKKKNIVLDVCTNLAAWPGRHLLDDGEKRKYFGLKTESRGIVEFECRNQREYELWTRGVSRLLSIVSQRKNRNGI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00170 485 Pfam Plant pleckstrin homology-like region 371 476 IPR013666 -
Car04g00170 485 MobiDBLite consensus disorder prediction 1 26 - -
Car04g00170 485 PANTHER AUXIN CANALIZATION PROTEIN 1 484 - -
Car04g00170 485 Pfam Auxin canalisation 25 328 IPR008546 -
Car04g00170 485 MobiDBLite consensus disorder prediction 109 147 - -
Car04g00170 485 MobiDBLite consensus disorder prediction 109 142 - -
Car04g00170 485 PANTHER EXPRESSED PROTEIN 1 484 IPR040269 -
Car04g00170 485 MobiDBLite consensus disorder prediction 47 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00170 Car-Chr4 1753874 1757800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00170 - - gmx:100782024 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00170 04 1753874 1757800 Car04g00170 04 1753874 1757800 ECH
Car03g02272 03 68723703 68727995 Car04g00170 04 1753874 1757800 PCT