Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02272 ATGGAACCAAACTGCACAATCAACTGTCGCCGCCCTGAATTCCTTCCAAGCGGCACTCCTCTGCCGGAGAGTCCTCGAGTTCCAATGGAGTTTCTGTCAAGGTCTTGGAGTGCCTCTGCTTTCGAAGTCACTAAAGCTCTTTCATCTCACTCTTCTTCATGCATGCTTTCAAATGGTTCTATTCCTGAAGAAACAACTACCACCCAGGACTTGTCTTCGTTACAATCTAAGAATCAATTCTCTTTTCCTACTTCTCAGTTTCTACTTGACCGCATTATGTCACATTCTGCTACTGAGGAAGTCTCGCCGTTAACGTCAGGTAGATTATCTCACAGTAGCGACCCTTTGAACGGTGGTGCTTCATTAACCGGAACAGAGAGTCCACCCATTTCAACTACAGATGAATTTGATGATGTTGTTAAGTTTTTTCGTGCAAACAATTCCATTCACCCATTATTCAATGGTGGAAGAGCAAGTGCTGCTAATAGCAACAGCACAGCTAATTCAGGACCTAAAACTGTGGGAAGGTGGTTGaaagaaagaagagaaaagaagaaagaagaaaacagaacacataaTGCTCAGCTGCACGCTACTATTTCAGTGGCTGCTGTTGCTGCTGCTATAGCAGCCATCGCGGCCGCAACTGCAGCCTCGTCAACACCAACCAAGGATGAAAAGATGGCCAAGACAGACATGGCTGTTGCTTCGGCTGCAACGTTAGTTGCAGCGCAGTGTGTGGAGGCTGCTGAAGCAATGGGAGCGGAGCGCGACCACCTTGCTTCTGTGGTCAGCTCAGCTGTGAATGTCCGTTCTCACGATGATATCACTACTCTTACTGCTGCAGCTGCCACAGCTCTCCGAGGAGCAGCAACATTGAAAGCTAGAGCTCTGAAGGAAGTATGGAATATTGCTGCAGTAACACCACTGCAGAAAGAAATGGGGAGTACAACAACATGTGGAAAACTTAATAACATGAACAGCATCACCAACCGCATAAATGACAATGGCGAAAATGTGAATGAAGAAACTGTTCAAAGTCCATGCACCGAAGAGTTTCTTGCAAGGGGTAGTGAATTACTCAAACGCACCCGCAATGGTGATCTGCATTGGAAAATAGTTTCTGTTTACATCCATCGAACCGGGCAGGTAATGCTGAAAATGAAGAGCAAACTCGTTGCAGGAACTATCACAAAAAAGAACAAGAACATTGTCCTAGACCTGTGCACGGATTTACCAGCATGGCCAGGAAGAGATCTATTAGACGATGGAGAAAAACGTCGGTACTTCGGATTGAAAACAGAATCGAGGGGAATTGTGGAGTTCGAGTGTAGAAATCAAAGAGAATATGATATCTGGACACAAGGGGTTTCTAAGCTTCTCTCAATTGTTGCACAAAGACAAAACAAATACAGCAATTAA 1422 0.4409 MEPNCTINCRRPEFLPSGTPLPESPRVPMEFLSRSWSASAFEVTKALSSHSSSCMLSNGSIPEETTTTQDLSSLQSKNQFSFPTSQFLLDRIMSHSATEEVSPLTSGRLSHSSDPLNGGASLTGTESPPISTTDEFDDVVKFFRANNSIHPLFNGGRASAANSNSTANSGPKTVGRWLKERREKKKEENRTHNAQLHATISVAAVAAAIAAIAAATAASSTPTKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIAAVTPLQKEMGSTTTCGKLNNMNSITNRINDNGENVNEETVQSPCTEEFLARGSELLKRTRNGDLHWKIVSVYIHRTGQVMLKMKSKLVAGTITKKNKNIVLDLCTDLPAWPGRDLLDDGEKRRYFGLKTESRGIVEFECRNQREYDIWTQGVSKLLSIVAQRQNKYSN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02272 473 Pfam Auxin canalisation 22 312 IPR008546 -
Car03g02272 473 MobiDBLite consensus disorder prediction 154 176 - -
Car03g02272 473 MobiDBLite consensus disorder prediction 99 133 - -
Car03g02272 473 PANTHER AUXIN CANALIZATION PROTEIN 1 472 - -
Car03g02272 473 MobiDBLite consensus disorder prediction 99 132 - -
Car03g02272 473 PANTHER EXPRESSED PROTEIN 1 472 IPR040269 -
Car03g02272 473 Pfam Plant pleckstrin homology-like region 359 464 IPR013666 -
Car03g02272 473 MobiDBLite consensus disorder prediction 157 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02272 Car-Chr3 68723703 68727995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02272 - - gmx:100793202 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02272 03 68723703 68727995 Car03g02272 03 68723703 68727995 ECH
Car03g02272 03 68723703 68727995 Car04g00170 04 1753874 1757800 PCT