Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00157 ATGGATGCAAAAATGATTTCACATAAAATAAATCCAACACCAACTATAGCTCATTCGAAGCCAAGACTTATTAAACCAAAACAAAATTTTGTGGTTGGAGTTCTTGCAAGGCCTTCAGATAACATTGGAGAAGAAACATTAAAGAAAACTAATGTATACAAAGATAATTGGTTTGATAAATTAGCCATAAACCACTTATCAAAAAGTGTTCAAGCAGCAACAGGAATCAGTAACAATAAGAGTGGTTTTGATAGCCTTGTAGAAGCAGCTACCGTGGCTTCACAAAAATTTAGTTCTGTTCAACAGCATGAAGTTGTTCTAGAAGCACTTGACAGAGCCTTTCCAAGACCAATACTTTCAATGATAAGGAAAGTGATGCCACCATCAAAATTAGCAAGGGAATATTTTGCCGTCTTCACCACTTTGTTCTTTGCTTGGTTACTCGGTCCCTCCGAGGTGAGAGAATCAGAAGTCGACGGAAAAAGAGAAAAAAATATTGTCTACATAAAAAAATGCAGATTCTTAGAAGAAACAAATTGTGTTGGAATGTGTATTAATCTCTGCAAAATGCCTTCTCAAATGTTCATAAAAGACTCGTTCGGTATGCCAGTCAACATGGTTCCAAATTTTGATGACATGAGTTGTGAGATGATATTTGGCCAGGAACCCCCATTATCGACTCATGATCCCGCACTCAACCAACCCTGCTATAAACTATGCAAGGCAAAGAAAAACCATGGAACAAATTGTCTCAATTAA 759 0.3676 MDAKMISHKINPTPTIAHSKPRLIKPKQNFVVGVLARPSDNIGEETLKKTNVYKDNWFDKLAINHLSKSVQAATGISNNKSGFDSLVEAATVASQKFSSVQQHEVVLEALDRAFPRPILSMIRKVMPPSKLAREYFAVFTTLFFAWLLGPSEVRESEVDGKREKNIVYIKKCRFLEETNCVGMCINLCKMPSQMFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPLSTHDPALNQPCYKLCKAKKNHGTNCLN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00157 252 PANTHER BETA-CAROTENE ISOMERASE D27 22 248 IPR038938 -
Car04g00157 252 Pfam Beta-carotene isomerase D27-like, C-terminal 146 225 IPR025114 GO:0005506
Car04g00157 252 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 22 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00157 Car-Chr4 1563801 1569760 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00157 K17911 - gmx:100782912 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00157 04 1563801 1569760 Car04g00157 04 1563801 1569760 ECH
Car03g02281 03 68807589 68812434 Car04g00157 04 1563801 1569760 PCT