Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02281 ATGGAAGCAAACGTTTTAAGAAAGAACATGATTTCGACACTAACTTCAACTCACTACGATCTGTTCAAACATAAACCTCAACATCCACCTTCTATAGTTTGTGTGCTCAAAAGGCCTTCAAATCATGACATTCCTAATGAAACAACAAAACATAGTACTAATGTCTACAAAGATAGCTGGTTTGATCTCTTAGCAATAAACCATTTATCAAAAAGTGTTCAAGCTGCCACAGGATTTAGAAACAATAAGAGTGGCTATGAGAGTCTTGTTGAGGCAGCTATTATGACAAAACAGAAATTTAATCCTATTCAGCAGCAAGAGGTTATCATTCAAGCTCTTGATACAGCCTTCCCTAAGATAATATTTTCATTGATAAAGAAACACCTACCACCATCTAAATTCACAAGGGAACATTTTGCCATTTTCAGCAGTTTGTTCTTTACTTGGTTAGTTGGGACCTCCGAGGTGAAAGAATCAGATGTCAACGGGAGAAGAGAAAAAAATGTAGTCTACATAAAAAAATGCAGGTTTTTAGAAGAGACAAATTGTGTAGGCATGTGTATTAATCTCTGTAAAATTCCAACTCAATCGTTTGTAAAGAACTCTCTGGGTATGCCAGTCAACATGGTACCAAATTTTGATGACATGAGTTGTGAGATGATATTTGGACAGGATCCTCCAGCATCAACTGATGATCCATCACTGAAAACACCTTGTTATAAACAATGCAAGGCATATAAAAGTCATGGAACAAACTGCCTCATTTAA 768 0.3607 MEANVLRKNMISTLTSTHYDLFKHKPQHPPSIVCVLKRPSNHDIPNETTKHSTNVYKDSWFDLLAINHLSKSVQAATGFRNNKSGYESLVEAAIMTKQKFNPIQQQEVIIQALDTAFPKIIFSLIKKHLPPSKFTREHFAIFSSLFFTWLVGTSEVKESDVNGRREKNVVYIKKCRFLEETNCVGMCINLCKIPTQSFVKNSLGMPVNMVPNFDDMSCEMIFGQDPPASTDDPSLKTPCYKQCKAYKSHGTNCLI 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02281 255 Pfam Beta-carotene isomerase D27-like, C-terminal 149 229 IPR025114 GO:0005506
Car03g02281 255 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 6 251 - -
Car03g02281 255 PANTHER BETA-CAROTENE ISOMERASE D27 6 251 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02281 Car-Chr3 68807589 68812434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02281 K17911 - gmx:100813404 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02281 03 68807589 68812434 Car04g00157 04 1563801 1569760 PCT