Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00049 ATGGAAGAAGCACTAGAGCTAGCACGCGCAAAAGACGCAAAAGAAAGAATGGCTGGCGTGGAGCGTCTCCACCAAGTTCTAGAAGCTTCTAGAAGAAGTCTCAGTTCAACCGAAGTTACTTCTCTCGTTGATTGTTGTTTGGATCTCTTGAAGGATAGTAGTTTTAGAGTCTCTCAGGGCGCGCTTCAAGCTTTGGCTTCCGCTGCCGTTCTCTCCGGCGATCACTTTAAGCTTCATTTCAACGCGCTTGTTCCCGCCGTCGTTGATCGATTAGGTGATGCTAAACAGCCTGTTCGCGATGCTGCTAGGAGGCTCTTGCTCACTCTCATGGAGGTTTCATCTCCTACAATAATTGTTGAAAGAGCAGGGTCTTTTGCTTGGACATGCAAAAACTGGAGAGTCAGAGAGGAATTTGCGCGAACTGTGACATCTGCAATCGGTCTATTTTCATCTACTGAACTACCCCTTCAACGGGCTATTCTTCCTCCTATTTTGCAATTGCTGAGTGATCCAAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAAATGTATGCACAAGCCGGGTCTCAATTTCGTGATGAACTTCAGCGCCACAACCTCCCTTCTTCTTTGGTGAAATATATTAATGCTAGGCTAGAGGGGATTCAACCAAAAGTTCAGTCTTCAAATGGTATTTCTAGTGGTTATATCCCCGGAGAAATTAATGCTTTGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAAAGAGACATCTCTTTTCGGAGTAGATGGCGATGTCACTGAGAAAGCCGTAGAACCTATCAAGGTGTATTCAGAGAAGGAATTAATCAGGGAAATTGAGAAGATTGCATCTACCCTTGTACCAGAAAAGGATTGGTCAATCAGAATTGCTGCCTTGCAGAGAATTGAACGTCTTGTTTTGGGAGGTGCTGCTGATTATCCATGTTTTTTTGGACTCTTAAAACAGCTTGTTGGACCTTTAAGCACACAACTGTCAGATCGAAGGTCTACCATTGTGAAGCAGGCATGCCATCTATTATGCTTTTTGTCGAAAGATTTCTTGGGTGATTTTGAAGCATGTGCTGAAATGTTCATACCAGTCCTTTTGAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAATTGCATAAAAACGATGCTACGCAACTGCAAGGTTGCACGTGTGCTCCCTCGGATAGCTGATTGTGCAAAAAATGACCGTAGTGCAATACTTCGTGCAAGGTGCTGTGATTATGCTCTTCTGATACTAGAACATTGGCCTGATGCACCAGAAATACAGCGATCAGCAGATTTATACGAGGATATGATAAGGTCTTGTGTTTCAGACGCAATGAGTGAGGTGCGGTCGACCGCCAGGATGTGCTACAGAATGTTCGCAAAAACTTGGCCAGATCGTTCCCGTCGCCTACTTTCATCCTTTGACCCTTCTATTCAAAGGTTAATAAATGAAGAGGATGGAAGCAAACATAGGCGGCATGCATCACCTTCCATTCGTGATAGAAGTGCACCAATGTCATCAACTAGTCAAGCTTCAGCTCCTTCTAATCTAACTGGTTATGGAACTTCTGCTATTGTTGCAATGGACAGAAGACCTAGTTTATCATCAGGGACTTCTATGTCCTCTGGTGTTCTGCTTTCACAAGCTAAGTCACTTGGTAAAGGTACAGAACGTAGTTTAGAAAGCGTACTGCATGCAAGTAAACAAAAGGTCACTGCTATTGAGAGCATGCTTAGAGGTTTGGATTTGTCAAATAAGCATAATTCATCTGCTCTGCGATCTTCAAGTTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCCCCATTCCCTGCTGCTGTTTCAGCATCTAATCATCTGACCACCCCTTTAACAACAGAATCAACTGCTTTGGGTTTCAGCAAAGGTAGTAGCCGGAGTGGTGGTTTGGGTTTGTCCGACATAATCACCCAAATTCAAGCTTCCAAAGATTCTGGCAAGTTATCATATAATAGCAATGTTGGTATTGAACCTTTATCAGATTTTTCGTCATACACAAGTAAAAGGACTACTGAAAAATTACAAGGAAGAAGTTCTGTTGATGAAAACAGTTACATCCGAGAGACTAGGCGGTATATGAATCCCAATGTGGATAGGCAGTATATGGATGCCCTTTATAGAGATGGAAACTTCAGGGATTCACCGAATAGTTATGTGCCTAATTTTCAGAGGCCACTATTGAGAAAGAATGTATCTGCACGCGTGTCTGCTGGCAGGAGGAGAAGTCTTGATGATAGTCAATTATCTCTAGGAGAGATGTCAAATTATGCAGATGGACCGGTATCTCTTCATGAAGCTCTGAGCGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCCAGGGTTTCTGCCTTTAATTACCTTCACTTGTTATTGGAGCAAGGTCAAAAGGGAATTCAAGAAGTAATCCAGAATTTTGAGAAGGTAATGAAGTTATTTTTTCAGCATTTGGATGACCCCCATCATAAAGTCGCACAGGCTGCTCTCTCCACACTTGCAGACATTATTCGTACATGCAGAAAGCCCTTTGAGGGTTACATGGAACGAATGTTACCCCATGTGTTTTCTCGTTTAATTGACCCCAAAGAGCTTGTTAGGCAAGCATGCTCTATGACTTTGGAGGCTGTTGGCAAAACATACAGTATAGATTCTCTCTTGCCTGCATTGCTACGTTCTCTTGATGAACAAAGGTCGCCAAAGGCTAAATTGGCTGTTATTGAGTTTGCAATCAGTTCCTTTAACAAGCATTCAAtgaatccagacggtgctgctaatatcggcatcctaaaattaTGGCTTGCCAAGTTAGCCCCATTGGTCCACGATAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCAGTATACTCTCACTTTGATTCATCTGCAGTTTTGAATTTTATTCTTAGTTTGTCAGTTGATGAACAAAATTCTTTGAGACGAGCCCTTAAACAGCGCACACCTCGAATTGAAGTAGACTTAATGAACTATCTGCAGAACAGGAAAGAGCGGCGTACTAAGTCTTCCTATGATCCATCTGATGTCGTGGGAACATCCTCTGAAGAGGGATATGCTGGTTTGTCTAGGAATGCTCATTACATTGGAAGGTATTCTGCTGGTTCTCTAGATAGTGATGGTGGCAGGAAATGGAGCTCCCTAGATTCAAACCTGATTAAAGCTAGTCTTGGCCAATCAGCTTCTGATGAAACTGAGCAACATTTGTATCAGAATTTTCAGACTGATCGTGATAGTGGCATTGTTGGTTCAAAAACCAAAGATCTTGCTTACACAGTCAATTCAATGGATCAAAACTTTGGCTATCAAACTGACCAACTTGGATATGTGGATAGTAGCATGAACTTTGAAGGTCTATCATCTGATGTGGATGTTAATGGTCTGACGTCATTAGAACATTTAAATATTGCCGAAGGCTATGGACATGGCAAAGAACATCTTTCTGAATTGAACCATAATCATCACTCAGCTGAAGATGTGAAGGTCAACCACATGACTGACATAGGACTCAGCATTCCTCAAATTCTTCATACGATATGCAGTGGGGGTGATGGAAGCACTATTTCAAGTAAGCGGACCGCACTTCTACAGTTAGTTGAAGCTTCTGTAGCAAATGATCATTCTGTTTGGATCCAGTACTTCAATCAGATATTGACTGTTGTGCTTGAGGTGCTGGATGATTCAGATTCTTCAATCAGAGAGCTTGTGCTTTCATTGATAGTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAAAATTCAGTTGAGATTGTAATTGAAAAGCTGCTTAATGTTACAAAGGATATTGTTCCCAAGGTCTCAAATGAAGCCGAACACTGCCTGACAATTGTTTTATCTCAGAATGATCCATTCAGATGTTTAAGTGTTATTATCCCTCTATTGGTTACCGAGGATGAGAAAACTCTCGTCACTAGCATAAATTGCTTGACTAAGATTGTAGGGCTGCTCTCTCAAGATGAACTGATGGCTCAGTTACCCTCATTTCTACCTGCATTGTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTCCGTAAGACTGTTGTTTTCTGTCTGGTGGATATTTATATCATGCTTGGGAAAGCCTTCTTGCCATATTTGGAAGGACTCAACAGCACACAGTTGAAGTTGGTTACCATTTACGCAAATCGAATCTCACAGGCAAGGACAGGAAAACCAATTGATGCTGCTAACGATTAG 4335 0.4159 MEEALELARAKDAKERMAGVERLHQVLEASRRSLSSTEVTSLVDCCLDLLKDSSFRVSQGALQALASAAVLSGDHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTCKNWRVREEFARTVTSAIGLFSSTELPLQRAILPPILQLLSDPNPAVREAAILCIEEMYAQAGSQFRDELQRHNLPSSLVKYINARLEGIQPKVQSSNGISSGYIPGEINALSVNPKKSSPKAKSSSKETSLFGVDGDVTEKAVEPIKVYSEKELIREIEKIASTLVPEKDWSIRIAALQRIERLVLGGAADYPCFFGLLKQLVGPLSTQLSDRRSTIVKQACHLLCFLSKDFLGDFEACAEMFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRSAILRARCCDYALLILEHWPDAPEIQRSADLYEDMIRSCVSDAMSEVRSTARMCYRMFAKTWPDRSRRLLSSFDPSIQRLINEEDGSKHRRHASPSIRDRSAPMSSTSQASAPSNLTGYGTSAIVAMDRRPSLSSGTSMSSGVLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSNKHNSSALRSSSLDLGVDPPSSRDPPFPAAVSASNHLTTPLTTESTALGFSKGSSRSGGLGLSDIITQIQASKDSGKLSYNSNVGIEPLSDFSSYTSKRTTEKLQGRSSVDENSYIRETRRYMNPNVDRQYMDALYRDGNFRDSPNSYVPNFQRPLLRKNVSARVSAGRRRSLDDSQLSLGEMSNYADGPVSLHEALSEGLSSGSDWSARVSAFNYLHLLLEQGQKGIQEVIQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIRTCRKPFEGYMERMLPHVFSRLIDPKELVRQACSMTLEAVGKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHSMNPDGAANIGILKLWLAKLAPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNRKERRTKSSYDPSDVVGTSSEEGYAGLSRNAHYIGRYSAGSLDSDGGRKWSSLDSNLIKASLGQSASDETEQHLYQNFQTDRDSGIVGSKTKDLAYTVNSMDQNFGYQTDQLGYVDSSMNFEGLSSDVDVNGLTSLEHLNIAEGYGHGKEHLSELNHNHHSAEDVKVNHMTDIGLSIPQILHTICSGGDGSTISSKRTALLQLVEASVANDHSVWIQYFNQILTVVLEVLDDSDSSIRELVLSLIVEMLKNQKDAMENSVEIVIEKLLNVTKDIVPKVSNEAEHCLTIVLSQNDPFRCLSVIIPLLVTEDEKTLVTSINCLTKIVGLLSQDELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISQARTGKPIDAAND 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00049 1444 MobiDBLite consensus disorder prediction 697 714 - -
Car04g00049 1444 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Car04g00049 1444 MobiDBLite consensus disorder prediction 697 719 - -
Car04g00049 1444 Coils Coil 1280 1300 - -
Car04g00049 1444 SUPERFAMILY ARM repeat 3 1413 IPR016024 -
Car04g00049 1444 Gene3D - 1225 1435 IPR011989 -
Car04g00049 1444 Gene3D - 1 222 IPR011989 -
Car04g00049 1444 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Car04g00049 1444 Pfam CLASP N terminal 284 500 IPR024395 -
Car04g00049 1444 Pfam CLASP N terminal 804 997 IPR024395 -
Car04g00049 1444 MobiDBLite consensus disorder prediction 605 619 - -
Car04g00049 1444 MobiDBLite consensus disorder prediction 499 536 - -
Car04g00049 1444 Gene3D - 797 1021 IPR011989 -
Car04g00049 1444 Gene3D - 267 512 IPR011989 -
Car04g00049 1444 PANTHER CLASP 28 1436 - -
Car04g00049 1444 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Car04g00049 1444 PANTHER PROTEIN, PUTATIVE-RELATED 28 1436 - -
Car04g00049 1444 Coils Coil 10 30 - -
Car04g00049 1444 MobiDBLite consensus disorder prediction 605 640 - -
Car04g00049 1444 MobiDBLite consensus disorder prediction 518 536 - -
Car04g00049 1444 SMART TOG_3 781 1029 IPR034085 -
Car04g00049 1444 SMART TOG_3 1203 1436 IPR034085 -
Car04g00049 1444 SMART TOG_3 270 514 IPR034085 -
Car04g00049 1444 SMART TOG_3 3 224 IPR034085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00049 Car-Chr4 530758 548162 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00049 K16578 - gmx:100801377 2409.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00049 04 530758 548162 Car04g00049 04 530758 548162 ECH
Car03g02389 03 69832662 69848694 Car04g00049 04 530758 548162 PCT