Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02389 ATGGAGGAAGCGTTGGAACTTGCACGCGCCAAAGACACTAAAGAAAGGATGGCCGGTGTAGAGCGTCTTTACCAACTTCTAGAAGCTTCTAGAAAAAGCCTTACATCTTCCGAAGTTACTTCGCTCGTCGATTCCTGCATCGATCTCTTGAAGGATAATAACTTCCGTGTTTCTCAGGGCGCACTTCAGTCTCTCGCCTCCGCCGCTGTTCTCTCCGGTGAACACTTTAAGCTACACTTTAACGCTCTTCTTCCCGCCGTCGTTGATCGACTTGGTGATGCTAAACAGCCTGTCCGTGATGCCGCACGCCGACTCCTTCTCACACTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGATCTTCTGCTTGGGCACACAAGAGCTGGAGAGTCAGAGAGGAGTTTACGCGAACTGTGACATCTGCAATTAATCTATTTTCAGCTACTGAACTTCCACTTCAACGGGCTATCCTTCCTCCTGTTTTGCAGTTGCTGAGTGACCCAAATCTTGCTGTTAGGGAGGCGGCTATTTTGTGCATTGAGGAGATGTATACACAAGCTGGGCCTCAGTTTCGCGATGAACTTCACCGCCACAATCTTCCTTCATCATTGGTGAAAGATATTAATGCCAGGCTAGAGGGGATTCAACCAAAAGTTCGCTCTTCAGATGGTATTCCAAGTGGTTATATTACTGGGGAAATTAAGCCTTTGGGTGTTAATCCCAAGAAAAGTAGTCCAAGGGCCAAAAGTTCTTCAAGAGAGGCCTCTCTTTTTGGAGCAGAAGGTGATGTCACCGAGAAACCCATAGAACCTATCAAGGTATACTCAGATAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCTACCCTTGTGCCTGAAAAAGACTGGTCCATTCGTATTGGTGCTATGCAGAGAATTGAAGGTCTTGTTCTAGGAGGTGCTGCTGATTATCCTTGTTTTCGTGGGCTTCTGAAGCAACTTGGTGGACCTTTAAGTACACAATTGTCAGACAGAAGATCTAGCATTGTAAAGCAGGCTTGTCATTTACTGTGCTTTTTGTCAAAGGATCTCTTGGGTGATTTTGAAGCATATGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGTAACTGCAAAGTTGCTCGTGTGCTTCCCCGTATAGCTGATTGTGCTAAAAATGATCGCAATGCAGTTCTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTCCTAGAACATTGGCCGGATGCACCTGAAATACATCGTTCAGCTGATTTATACGAGGATATGATAAAGTGTTGTGTTTCGGATGCTATGAGTGAGGTACGATCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCTCGTCGTCTATTTTCATCCTTTGACCCTGTTATTCAACGGTTAATAAATGAAGAGGATGGAGGAATACACAGGCGACATGCTTCGCCTTCCATTCGTGATAGAGGTGCATCGATGTCATTACCCAGTCAAGCATCTGTTTCTTCTAATCCACCTGGTTATGGAACATCTGCAATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGACATCTGTGTCCTCTGGTGTACTTCTTTCACAGGCAAAGTCACATGGTAAGGGTACAGAACGAAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGCTTGGCTTTGTCTGATAAGCATAATCCATCTTCTCTCCGATCATCAAGTTTGGATCTAGAAGTTGACCCTCCATCATCTCGTGATCCCCCATACCCCGCTGCTGTATCTGCATCAAATCATATGACAAGCTCTTTATCAACAGAACCTATTGCTTATGGTGTCTATAAAGGTAGTAACCGAAATGGTGGTCTTGGTTTGTCCGACATAATCACTCAAATTCAAGCTTCCAAAGATTCTGCCAAGTCATCATATCATAGTAATGTTGAAATTGAGTCTTTATCATCACTATCCTCATATTCAACTAGAAGGCCTTCTGAAAGATTACAAGAAAGAAGTTCTGCTGATGACATTAGTGACATTAAGGAGGCTAGGCGATTTATGAACCACAACAATGACAAGCAGTATTTGGATGCCCCTTATAGAGATGGAAACTATAGAGAATCACATAATAGTTATGTGCCAAATTTTCAGAGGCCACTGCTAAGAAAGAATGTAGCTGGACGTACGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAACCAGTTATCTCTTGGAGAAATGTCAAGTTATGCTGATGGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTTAGTTCAGGTTCTGATTGGTCTGCTAGGGTTGCAGCATTTAACTATCTTCACTCGTTGTTGCAGCAAGGTCCAAAGGGAACTCTGGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCTCACCATAAAGTTGCGCAGGCTGCTCTTTCAACACTAGCAGATATTGTTCCAACATGTCGAAAGCCTTTCGAGGGTTACATGGAAAGAATATTACCACATGTGTTTTCTCGGTTAATTGACCCTAAAGAGGTTGTTAGGCAGCCATGTTCAACAACATTGGAAGTTGTTAGCAAAAATTACAGTATAGATTCTCTCTTACCTGCACTGTTACGTTCACTAGATGAACAAAGGTCTCCAAAGGCCAAATTGGCCGTGATTGAATTCGCAATCAGTTCCTTTAACAAACATGCAATGAATGCAGAAGGTGCTGCTAATATTGGCATACTGAAATTGTGGCTTGCTAAGTTAACCCCTTTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACTTGCATTATATCAGTGTACACTCACTTTGATTCAATTGCAGTTCTTAATTTCATTCTTAGTTTGTCAGTTGAAGAACAAAATTCTTTGAGACGAGCCCTTAAACAGTACACCCCTCGCATTGAAGTAGACCTAATAAACTATCTGCAGAACAAGAGAGAACGACAGCGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTAGGAACATCATCAGAAGATGGGTATGTTGGTTTCTCTAGGAAAGCTCATTACCTTGGAAGATATTCGGTTGGTTCCCTAGATAGCGACGGTGGCAGGAAGTGGAGCTCCCAGGATTCAACTCTTTTGAAAGCCAGTCTGGGTCCAGCGGCTTCTGTTGAAACCGAGGATCATAATCAGAATCTTGAGACTGATTCCAATGTCGACAGTCTTGGTTCAAAACTCAAAGATCTTGCATGTTCAGTCAATTCAATGGGTCAAAATTTTGGCTCTCAGTCTAGCCAACTTGCACATATGGACAGTAGCATGAATTTCGAGGGTCTTTCAACTCCTCAACTAGATGTTAATGGTCTGATATCATTAGAGCGTTTAAATGTTGGTGAAAACTATGCACATGACAAAGAACATCCTTCTGAATTGGAACTTAATCATCACTCAACTGAAGCTGACAAGATTAACTCCATGACAGACACTGGGCCTAGCATTCCTCAAATTCTTCATATGATATGCAATGCTAATGATGGAAGCCCTGTTTCAAGTAAACAGACTGCACTTCAACAGTTAGTTGAAGCTTCTACAACAAATGACCATTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCGGATTCCTCAGTCAGAGAGTTTGCTCTTACATTGATAGTTGAAATGCTCAAAAACCAGAAAGATGCCCTGGAGAATTCAGTTGAGATTGTAATTGAGAAGCTGCTTCAAGTTACAAAAGATATCATTCCTAAGGTTTCAAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCACTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTTACTGAGGATGAGAAAACGCTTGTCACTTGCATTAATTGCTTAACAAAGCTTGTGGGCAGGCTCTCTCAGGAGGAACTGATGGCTCAGTTACCGTCTTTTCTGCCTGCTCTTTTTGAAGCTTTTGGAAACCAGAGTGCAGATGTTCGCAAGACTGTTGTTTTCTGTCTGGTGGACATTTATATCATGCTTGGGAAAGCATTCTTGCCGTATTTGCAAGGTCTTAACAGCACACAGTTGAAGCTGGTCACCATTTATGCGAATCGAATCTCACAAGCGAGGACAGGGAAAGCAATTGATGCCATTCATGATTAG 4338 0.423 MEEALELARAKDTKERMAGVERLYQLLEASRKSLTSSEVTSLVDSCIDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSSAWAHKSWRVREEFTRTVTSAINLFSATELPLQRAILPPVLQLLSDPNLAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGIPSGYITGEIKPLGVNPKKSSPRAKSSSREASLFGAEGDVTEKPIEPIKVYSDKELIREIEKIASTLVPEKDWSIRIGAMQRIEGLVLGGAADYPCFRGLLKQLGGPLSTQLSDRRSSIVKQACHLLCFLSKDLLGDFEAYAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGASMSLPSQASVSSNPPGYGTSAIVAMDRSSSLSSGTSVSSGVLLSQAKSHGKGTERSLESVLHASKQKVTAIESMLRGLALSDKHNPSSLRSSSLDLEVDPPSSRDPPYPAAVSASNHMTSSLSTEPIAYGVYKGSNRNGGLGLSDIITQIQASKDSAKSSYHSNVEIESLSSLSSYSTRRPSERLQERSSADDISDIKEARRFMNHNNDKQYLDAPYRDGNYRESHNSYVPNFQRPLLRKNVAGRTSAGRRRSFDDNQLSLGEMSSYADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPTCRKPFEGYMERILPHVFSRLIDPKEVVRQPCSTTLEVVSKNYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNAEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYTHFDSIAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQNKRERQRSKSSYDPSDVVGTSSEDGYVGFSRKAHYLGRYSVGSLDSDGGRKWSSQDSTLLKASLGPAASVETEDHNQNLETDSNVDSLGSKLKDLACSVNSMGQNFGSQSSQLAHMDSSMNFEGLSTPQLDVNGLISLERLNVGENYAHDKEHPSELELNHHSTEADKINSMTDTGPSIPQILHMICNANDGSPVSSKQTALQQLVEASTTNDHSVWTKYFNQILTVVLEVLDDSDSSVREFALTLIVEMLKNQKDALENSVEIVIEKLLQVTKDIIPKVSNEAEHCLTIVLSQYDPLRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDAIHD 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02389 1445 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Car03g02389 1445 SUPERFAMILY ARM repeat 289 1435 IPR016024 -
Car03g02389 1445 MobiDBLite consensus disorder prediction 507 536 - -
Car03g02389 1445 Pfam Vacuolar 14 Fab1-binding region 1236 1318 - -
Car03g02389 1445 Gene3D - 267 506 IPR011989 -
Car03g02389 1445 MobiDBLite consensus disorder prediction 239 263 - -
Car03g02389 1445 SMART TOG_3 282 514 IPR034085 -
Car03g02389 1445 SMART TOG_3 3 224 IPR034085 -
Car03g02389 1445 SMART TOG_3 784 1030 IPR034085 -
Car03g02389 1445 SMART TOG_3 1201 1437 IPR034085 -
Car03g02389 1445 Gene3D - 1219 1437 IPR011989 -
Car03g02389 1445 Gene3D - 1 221 IPR011989 -
Car03g02389 1445 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Car03g02389 1445 Coils Coil 1281 1301 - -
Car03g02389 1445 MobiDBLite consensus disorder prediction 1098 1119 - -
Car03g02389 1445 MobiDBLite consensus disorder prediction 603 638 - -
Car03g02389 1445 MobiDBLite consensus disorder prediction 691 714 - -
Car03g02389 1445 MobiDBLite consensus disorder prediction 605 619 - -
Car03g02389 1445 SUPERFAMILY ARM repeat 5 402 IPR016024 -
Car03g02389 1445 Pfam CLASP N terminal 803 993 IPR024395 -
Car03g02389 1445 Pfam CLASP N terminal 284 500 IPR024395 -
Car03g02389 1445 PANTHER PROTEIN, PUTATIVE-RELATED 28 1437 - -
Car03g02389 1445 MobiDBLite consensus disorder prediction 520 536 - -
Car03g02389 1445 Gene3D - 797 1021 IPR011989 -
Car03g02389 1445 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Car03g02389 1445 PANTHER CLASP 28 1437 - -
Car03g02389 1445 Coils Coil 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02389 Car-Chr3 69832662 69848694 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02389 K16578 - gmx:100796697 2469.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02389 03 69832662 69848694 Car03g02389 03 69832662 69848694 ECH
Car03g02389 03 69832662 69848694 Car04g00049 04 530758 548162 PCT