Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00017 ATGAATTCTCTCCCTAAAACACACCACTATCATCATCACCTCTCTTTCActcacactcattcttcatttccaataatacccttctctttctctttctctttctccttcccctctcatccattctcatcatcatCCATCAAAGCCTCCTCCTCACCGTCACCAAAAAACCACAATCCGTTTCATCAAAAACCTCGAAACGCTTTTTTCCAATTGCTCCAAACCCTAAACCCCATTTTCTCACCTCTCTTCGAACCCGCTTACGTGGCTATAGCAGTTATCGCATTCTTCTTAATTCGCATTCAACACAACCCCGCCGCCGCAACTTCTACACTTTTACCTCCGCCGCCCGCGGAATCCTCCACGGCAACCACCGCCACTACAAAAAATCAAACTAGTAAAGAAAACAATAGCGCAATCGAAGAGCAATTGAAAAACAATTCCAACGATGCAAACGCTCTTCGTTCTCTCGTGGAGGAAAATGTAAGAGCACTCAAACTAAGCGAAGCTATTAGGTTCCTTGACCGATTAATCGAACTCGAACCGGAGGATTTCGATTTGCATCTTCTGAAAGCACATTTGCATAGGCACAACGGTGAGCATGAATTGGCTAAGATAAGTTTCGAACTTGTTCTGAAGCAAGAGCCGGTTAACATAGAAGCTTATCGCGGTCTTTTGATGACGAATTTGGAATTGAATGAACCAATGGAGAGTTTTTTGAATAGGGTTGATCAAGTAGTGAAGTTTTTTGAAGAACAAAAAATGGACTCAGAAGTGAGGGAATTTAAGCTTTTGATTGCGCAAGTGAAGGTAATGGAAGAAGATTATTCGGGTGCTTTGAAGGTTTATGAGGAGATTGTGAAGCAAGAACCAAGAGATTTTAGACCATATTTGTGTCAGGGTGTTGTTTATACTTTGCTTAGAAAGAATGATGAAGCTGAGAAACAGTTTGAAGAGTATAGAAGACTTGTTCCTGAGAATCATCCTTATAAAGAGTATTTTGAGAATAACACTAAGATTTTTTCCAGGAAGCTAGAAAGGGAAGGAATAGATGCAAAGAGTTTAGATTGGGAATCACAACCACGCAGTTCCAATATAGAGGTTGTCTCTGATGTTGTTTTTTTTATTTTTTTGTTAAAGTGA 1140 0.3728 MNSLPKTHHYHHHLSFTHTHSSFPIIPFSFSFSFSFPSHPFSSSSIKASSSPSPKNHNPFHQKPRNAFFQLLQTLNPIFSPLFEPAYVAIAVIAFFLIRIQHNPAAATSTLLPPPPAESSTATTATTKNQTSKENNSAIEEQLKNNSNDANALRSLVEENVRALKLSEAIRFLDRLIELEPEDFDLHLLKAHLHRHNGEHELAKISFELVLKQEPVNIEAYRGLLMTNLELNEPMESFLNRVDQVVKFFEEQKMDSEVREFKLLIAQVKVMEEDYSGALKVYEEIVKQEPRDFRPYLCQGVVYTLLRKNDEAEKQFEEYRRLVPENHPYKEYFENNTKIFSRKLEREGIDAKSLDWESQPRSSNIEVVSDVVFFIFLLK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00017 379 SUPERFAMILY TPR-like 165 317 IPR011990 GO:0005515
Car04g00017 379 SMART tpr_5 150 183 IPR019734 GO:0005515
Car04g00017 379 SMART tpr_5 259 292 IPR019734 GO:0005515
Car04g00017 379 SMART tpr_5 293 326 IPR019734 GO:0005515
Car04g00017 379 SMART tpr_5 184 217 IPR019734 GO:0005515
Car04g00017 379 Gene3D Tetratricopeptide repeat domain 110 340 IPR011990 GO:0005515
Car04g00017 379 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 347 - -
Car04g00017 379 MobiDBLite consensus disorder prediction 108 137 - -
Car04g00017 379 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00017 Car-Chr4 171757 172896 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00017 - - cam:101497721 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02422 03 70110928 70113019 Car04g00017 04 171757 172896 PCT