Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02422 ATGGATTCCATGCCTAACCTTCGTCACTCCCATCTCCCACTCAATTACAACCGTTCATCATTCCCATCCTCCTTATCACCTTCCCTCACCTTCACCTCCCTCCCACCACCTCAATTTCCGCTTCCCTCATCGTTTAAACTACAATCCATAAGAGCCTCATCCTCCTCAAACGACCCTGCGTTTCACAAGCAAAGAAAAACCCCTTCACTACCAAACCCATTCCAAGCCCTAACCCCTCTCTTCTCCCCCGTCGTTGAAACCACCTGCATCGTCATTGCCGCAACCGCTTTCTTCTTCATGCGTTTCCACCACAGTCCCGTCATCGCCGCCACGCTCGCACCTCCGACTACCGCTGAAACCTCAACGGTAAAGGAAAACGTCTCAACGGAAGAAGATGCGGAGAAGGCAATCGAAGCACGATTGAGCCAAAATCCAAACGACGCTGAAGCTCTTCGCGCTCTTATGGAGGTTAAATTCAGAGCACGAAAGGTCGACGAGTCGATTGGAGTCATAGACCGTTTAATCGAAATCGAACCTGAAGAAATGGAGTGGCCTCTGCTGAAAGCAAACATGTATATCTACAACGACGACCACGAATCAGCGAAAACATTATTCGAGGACATTCTGAAGAAGGATCCGCTTCGAGTGGAAGCTTTTCATGGTCTCGTAATGGCGACTTTGGAATCGCATGAACCGTTGAAAGGATTGTTGAAAAGAGTTGAAAAAGCAATGGAATTGTGTAAGAAACAGAAGAGGGTTTCAGATGTTAGAGACTTTAGGCTATTGGTTGGTCAGATTAAGGTGATTGAAGGGAATTTCTCTGAGGCACTTAAAGCTTATCAGGATTTGGTAAAAGAAGAACCAAGAGATTTTAGGCCTTATCTATGTCAGGGTATTATATATACCTTGCTTAGAAAGAAAGATGAAGCTGAGAAGCAATTTGACCAGTTTCGCAGGCTTGTTCCGAAGAATCATCCTTATAAAGAGTATTTTGATGATAACATGTATGGCACCAAGTTTTCTTCGCAGAACCTCGAGAGGGAAGGAGCTGCTGCTAGGAGTTGA 1065 0.4573 MDSMPNLRHSHLPLNYNRSSFPSSLSPSLTFTSLPPPQFPLPSSFKLQSIRASSSSNDPAFHKQRKTPSLPNPFQALTPLFSPVVETTCIVIAATAFFFMRFHHSPVIAATLAPPTTAETSTVKENVSTEEDAEKAIEARLSQNPNDAEALRALMEVKFRARKVDESIGVIDRLIEIEPEEMEWPLLKANMYIYNDDHESAKTLFEDILKKDPLRVEAFHGLVMATLESHEPLKGLLKRVEKAMELCKKQKRVSDVRDFRLLVGQIKVIEGNFSEALKAYQDLVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFDQFRRLVPKNHPYKEYFDDNMYGTKFSSQNLEREGAAARS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02422 354 SUPERFAMILY TPR-like 131 325 IPR011990 GO:0005515
Car03g02422 354 ProSiteProfiles TPR repeat profile. 257 290 IPR019734 GO:0005515
Car03g02422 354 Gene3D Tetratricopeptide repeat domain 116 339 IPR011990 GO:0005515
Car03g02422 354 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 346 - -
Car03g02422 354 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 346 - -
Car03g02422 354 Pfam Tetratricopeptide repeat 271 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02422 Car-Chr3 70110928 70113019 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02422 - - gmx:100778644 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02422 03 70110928 70113019 Car04g00017 04 171757 172896 PCT