Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02709 ATGGAACATCAAGAATCAAGTGTCGAGATATTTGAGAAATTCACATGGAAGATTGAGAACTTCTGTAGCTTGGATGTTGAGAAAATATACTCTAAACCTTTCATCATAGACGGTTATCCATGGAGGATTGTTTTGTATCCAAGGGGGCATAAAGTAGATGACAAATTATCAATTTATTTAGAGGCTATGCAAACTGCAAATATGTCTCAGGGATGGGGCAGAGATGTCAGATTTGAATTGGCTGTATTCAATCAGCTCGATACCAACATCACAATCACAAAAGGATCTAAGAACAAGTTCAATGCAAGTGGGCAAGATGCTTGGGGTTTCAAATCATTCATGTCTTTAAGTGAGCTTCATGATCCTAAAAAGGGGTTTATTGTGAAGAATGTTTGTATTGTTGGTGCAGAAGTTTTTGTTTGTAAGTCAAACTATGAGAAACAAGTAAGTGAAGCAACTAACTTAACTGAGAGTAAAAAAATCCATATTGAAGTGGAAGTTGAAGCCCCACCACATATGCAAAATATTTCACCATTTTTTTCACTAGTTTGCAATGAGCCTACTAAACAACATATTGATGCAGAGTTGTTCTATCCCTCAATTGAAGAGATTATGGATTTCACTAGTGTTGGACAATTAGAGGAAATATATTTTGATCATCCTTCACTTATTGAGTGCAAGTTTATTGATTTGGCGTTTGCCGCATTGGGGAGAGTTACATATTTCATTAAGACTAGAAAAGTGAAAGATATGAATGAGCAAGCTTGTGAGGATCTTCAAGTTTTATGGGAGGAACTTGAGAAATTTATATTTGATTTGACTTGGTTAGAGCCTCATGTTCTATTTGCTTTAGGAATGAAAAGTTATGTGGAGAAAGCTATGAAAGTAGAAAAGTTGAAGGAGAATGTGGCAGCTCTAGAGATGGAATCAGAGAGGTTAAAGGAAAAGTTGGTTGTTGCTGAGATCAATCTTAACATAGAAAAAGACTCATTGAAGGCAAAAAGGTTGGAAGAAATAGATTTGGAATCTGAATTGGGATGTGGGAGATAG 1050 0.3581 MEHQESSVEIFEKFTWKIENFCSLDVEKIYSKPFIIDGYPWRIVLYPRGHKVDDKLSIYLEAMQTANMSQGWGRDVRFELAVFNQLDTNITITKGSKNKFNASGQDAWGFKSFMSLSELHDPKKGFIVKNVCIVGAEVFVCKSNYEKQVSEATNLTESKKIHIEVEVEAPPHMQNISPFFSLVCNEPTKQHIDAELFYPSIEEIMDFTSVGQLEEIYFDHPSLIECKFIDLAFAALGRVTYFIKTRKVKDMNEQACEDLQVLWEELEKFIFDLTWLEPHVLFALGMKSYVEKAMKVEKLKENVAALEMESERLKEKLVVAEINLNIEKDSLKAKRLEEIDLESELGCGR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02709 349 Coils Coil 289 323 - -
Car03g02709 349 CDD MATH 13 138 IPR002083 GO:0005515
Car03g02709 349 ProSiteProfiles MATH/TRAF domain profile. 11 138 IPR002083 GO:0005515
Car03g02709 349 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 11 169 IPR008974 GO:0005515
Car03g02709 349 Pfam MATH domain 18 140 IPR002083 GO:0005515
Car03g02709 349 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 332 - -
Car03g02709 349 SUPERFAMILY TRAF domain-like 13 143 - -
Car03g02709 349 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 332 - -
Car03g02709 349 SMART math_3 13 119 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02709 Car-Chr3 72751815 72753390 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02709 - - cam:101489930 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02709 03 72751815 72753390 Car03g02709 03 72751815 72753390 ECH
Car03g02709 03 72751815 72753390 Car05g01817 05 63330757 63347062 ECH