Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02383 ATGGCATGCATTTCGAAGTCATTCAATGGCACCTCCTTCGACGCATATTCATCCTCTTTTCCTCATCATATCACTCAATTTCGACGCCGCATCTATTCTAACTCAATCACATTCCGTTGCACAAGTATCAAGATCTCCTCCTCCACCGTTCCTCCTCTTCCTGATAACCGCATCATCGTTGGATGCGGAATGACGACGGTTGATTTCTTGGCGACTGTAGATAGATATCCGAAACCGGATGATAAGGTACGAACCACCTCCTTCAAAGTTCAGGGAGGTGGAAATGCCGGTAACGCTTTAACTTGTGCGGCTCGACTCGGCTTGAAACCCAAACTCATCTCCAAGGTTGCAGATGATGCTCAAGGAAGGAGCATATTAAAGGAACTAGAAGCTGACGGTGTCGATAGTTCCTTTATCGTTGTATCCAAGGGTGGTAGTTCGACATTTTCATATGTACTAGTAGACAGCCAAACGAAAACTCGCACAAGTATTTACACCCCTGGAGATCCTCCCTTGGTGCCAGATGATTTGTCCCAGTCAATGCTATTATCTGCATTTGATGAAGCAAGATTAATATATTTTGATGGAATGTCTACCGAAACTGCTCTATTTGTTGGACAAGAGGCAGCTCGCAATAATATTCCTATTTTAGTTGAGGCAGAATCACCAAGGGAAGGGTTGGATGAGCTCTTGAAGCTTGCTGATTTTGTTGTATGTTCAGCAAGGTTTCCACAGGCTTGGACACAGGCACCATCTATCCCGAGTGCATTGGTTTCCATGCTTTTAAGATTGCCAAATGTCAAGTTTGTGATTGTGACTCTGGGTGAAGATGGTTGTCTAATGTTGGAAAGAAGTACAAATGTGGATGGTGACATAGAAGAAACGGATGTAGAGAGTTTCTTAGAATTCTTGTACAAAGAGAAAGATGATAGCTTGACTATTCCAACCTGCATACCATCGGTGGTGACAAAATTCAGAGCAAATAGAATAGGGACAGTTTGTGGGAGATTCTTTATTGGAACAGCAGAGAAGATACCGGATTCTGAGCTTATCGATACAACTGGTGCAGGGGATGCATTTATTGGAGCAATTCTGTATGCCATATGCGCAAACATGGTACCAGAGATAATGTTGCCATTTGCTGCTCAAGTGGCAGCTGCCAAGTGTAGAGCTTTGGGAGCTCGAACTGGTCTTCCGCATCGAACAGATCCACGCTTGGCATCCTTTTTATGCTAA 1236 0.4393 MACISKSFNGTSFDAYSSSFPHHITQFRRRIYSNSITFRCTSIKISSSTVPPLPDNRIIVGCGMTTVDFLATVDRYPKPDDKVRTTSFKVQGGGNAGNALTCAARLGLKPKLISKVADDAQGRSILKELEADGVDSSFIVVSKGGSSTFSYVLVDSQTKTRTSIYTPGDPPLVPDDLSQSMLLSAFDEARLIYFDGMSTETALFVGQEAARNNIPILVEAESPREGLDELLKLADFVVCSARFPQAWTQAPSIPSALVSMLLRLPNVKFVIVTLGEDGCLMLERSTNVDGDIEETDVESFLEFLYKEKDDSLTIPTCIPSVVTKFRANRIGTVCGRFFIGTAEKIPDSELIDTTGAGDAFIGAILYAICANMVPEIMLPFAAQVAAAKCRALGARTGLPHRTDPRLASFLC 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02383 411 Pfam pfkB family carbohydrate kinase 63 287 IPR011611 -
Car03g02383 411 Pfam pfkB family carbohydrate kinase 343 400 IPR011611 -
Car03g02383 411 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 11 410 - -
Car03g02383 411 PRINTS Ribokinase signature 61 82 IPR002139 GO:0016301
Car03g02383 411 PRINTS Ribokinase signature 88 107 IPR002139 GO:0016301
Car03g02383 411 PRINTS Ribokinase signature 270 281 IPR002139 GO:0016301
Car03g02383 411 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 352 365 IPR002173 GO:0016773
Car03g02383 411 SUPERFAMILY Ribokinase-like 59 402 IPR029056 -
Car03g02383 411 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 11 410 - -
Car03g02383 411 CDD ribokinase_group_B 58 400 - -
Car03g02383 411 Gene3D - 58 396 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02383 Car-Chr3 69734551 69741313 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02383 - - gmx:100792838 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02383 03 69734551 69741313 Car04g00060 04 652915 658774 PCT