Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02265 ATGGCAGATAGAAGAATTGAGATGCTGCTAAGCATGGTCCTTGTTGTAATGGCTCTTCGGGGTGTCACAGTGGCACAATTTGACTCAAGTTGTGCCAATATACTCTTGAGTCTTTCTCCATGCCTTGACTACATAACAGAAAACTCTTCCATCCCTTCCTCTGGTTGTTGCTCACAACTTGCATCTGTGGTCGGGTCACAACCACAGTGCCTATGTGAGGTTGTTAACGGCGGTGCTTCGTCTATTGCTGCTAGTCTCAACATCAATCAAACTCGTGCTTTCGCACTCCCCGCAACTTGCAATGTCCAAACACCTCctatcaatgcctgcagagGATCAGCTTCTACTTCTCCTCCGGTGGGTGTTTCTATTTACAACATTCCAAATTCTCCTTCAACTACGGGAAGTGGTGGAAGTATCCGTGGCCCAACTTATGGAACATCAACTTCTACAAGATTACAATATTCTATGCTTCTTCTGATTATCTTCGCTGTTGTTTTTATTTCACCTTGCCGTTTTCTTCGCCCTTCGTCTCATCTCATAATCCAATTCCTTCTTTTGCCTCTCTCTCTTCAATCAAATTTTCCGATTCCTTTTCTTCTTCCTTCCTATTCGTTGCCAGGTGAACCTTCCATAATAGCAGGAAGCCTTCCTGATGCTGTTGCAATAAGATGTCTTGCACGCGTTCCCTTCTACCTCCACCCGAAGTTAGAGGTTGTCTCTCGTTCTTGGCAAGCAGCCATTCGTAGCCCAGAACTAATAAAAGTTCGAAAGGAAGTTGGTTCATCTGAGGATCTCTTGTGTGTCTGTGCTTTTGATCCAGAGAACGTATGGCAACTGTATGACCCTCTAAGAGATCTCTGGATTACCCTTCCTGTTCTTCCCTCAAAGATCAGACACCTTTCTCACTTTGGTGCTGTATCCACGGCTGGAAAGTTGTTTGTGATTGGCGGTGGAAGTGATGCTGTCGATCCTTTGACCGGCGACCATGATGGATGTTTTGCAACCGATGAAGTCTGGTCATATGATCCCGTAATCCGGCAGTGGGCCCCTCAGGCTCCAATGCTTGTTCCCCGTTCTATGTTTGCATGTTGTGTTATGAATGGAAAAATTGTTGTCGCCGGGGGATTCACTAGCTGTAGGAAAACAATATCTCAAGCAGAAACGTATGACCCTGAGAATGATGTTTGGACTCCAATGCCTGATCTTCATCGCACTCATAATTCAGCTTGTTCAGGAATAGTGATTGGAGGAAAGATGCATGTACTGCACAAGGATATGTCAACAGTGCAAGTTTTAAACAATGCAGGGACTGGATGGATCGTCGAGGAGTGTGATTGGCTTCAAGGTCCAATGGCAGTAGTCCAGGATGCACTTTGTGTTATGAGCAATGGATGTATCATAAAGCAAGACAAAGAAGGGAAAAAGATTATAAGTTCAGCAACAGAGTTTAAAAAGAGAATTGGGTTTGCAATGATTGGACTAGGCGATGATTTATACATGATTGGAGGCTTCATTGGACCTGACAGATGGAATTGGGACATTAAGCCATTATCAGAAGTTGATGTTCTCACACTTGGGAGTGAGAGGCCAACTTGTGAAAGACCAACTTGGCGCCAAACAGCTCCAATGACAAGGTGTCGAGGTACCATTCATGGTTGTACACTGCTGAGAATTTAG 1680 0.4417 MADRRIEMLLSMVLVVMALRGVTVAQFDSSCANILLSLSPCLDYITENSSIPSSGCCSQLASVVGSQPQCLCEVVNGGASSIAASLNINQTRAFALPATCNVQTPPINACRGSASTSPPVGVSIYNIPNSPSTTGSGGSIRGPTYGTSTSTRLQYSMLLLIIFAVVFISPCRFLRPSSHLIIQFLLLPLSLQSNFPIPFLLPSYSLPGEPSIIAGSLPDAVAIRCLARVPFYLHPKLEVVSRSWQAAIRSPELIKVRKEVGSSEDLLCVCAFDPENVWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDHDGCFATDEVWSYDPVIRQWAPQAPMLVPRSMFACCVMNGKIVVAGGFTSCRKTISQAETYDPENDVWTPMPDLHRTHNSACSGIVIGGKMHVLHKDMSTVQVLNNAGTGWIVEECDWLQGPMAVVQDALCVMSNGCIIKQDKEGKKIISSATEFKKRIGFAMIGLGDDLYMIGGFIGPDRWNWDIKPLSEVDVLTLGSERPTCERPTWRQTAPMTRCRGTIHGCTLLRI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02265 559 Gene3D - 270 558 IPR015915 GO:0005515
Car03g02265 559 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 215 559 - -
Car03g02265 559 Gene3D - 29 107 IPR036312 -
Car03g02265 559 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 111 IPR036312 -
Car03g02265 559 SMART aai_6 31 110 IPR016140 -
Car03g02265 559 SMART kelc_smart 498 558 IPR006652 GO:0005515
Car03g02265 559 SMART kelc_smart 312 369 IPR006652 GO:0005515
Car03g02265 559 SMART kelc_smart 370 417 IPR006652 GO:0005515
Car03g02265 559 Pfam Kelch motif 358 403 IPR006652 GO:0005515
Car03g02265 559 Pfam Kelch motif 301 355 IPR006652 GO:0005515
Car03g02265 559 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 215 559 - -
Car03g02265 559 CDD AAI_LTSS 38 102 - -
Car03g02265 559 PRINTS Plant phospholipid transfer protein signature 87 104 IPR000528 GO:0006869|GO:0008289
Car03g02265 559 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Car03g02265 559 PRINTS Plant phospholipid transfer protein signature 51 65 IPR000528 GO:0006869|GO:0008289
Car03g02265 559 Pfam Probable lipid transfer 14 110 IPR016140 -
Car03g02265 559 SUPERFAMILY Kelch motif 270 530 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02265 Car-Chr3 68639341 68645701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02265 5 166 Lipid Metabolism Gene Families AT3G22600 41.071 1.34e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02265 - - cam:101512165 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02265 03 68639341 68645701 Car03g02265 03 68639341 68645701 ECH
Car04g00180 04 1865862 1866895 Car03g02265 03 68639341 68645701 PCT