Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02244 ATGACAAAGAGCGTGACCGGTCAAAGTGGAGTTCGAGTCGTCGTCGCCGGTGATCGAGGCACCGGAAAATCAAGCCTCATAGCTGCTATAGCTTCGGATTCATTCTCCGACGACGTTCCCTCCTTGCTTCCGCCCACTCTATTGTCCGCTGATTTTTTCCCCGACAACGTTCCCCTAACCATCATTGACACGTCTTCTAGCTTGGAGAAACAAAACAAGCGTAATGAAGAATTGAAAGGTGCTGATGTTGTGGTTTTAACATATGCTTGCAATGATTCCCAATCCTTTTTGCGATTGAGTTCTTACTGGTTCCGGGAACTGCAGAGCTTGGAGGTAAAGGCACCTGTAATTGTGGTTGGTTGCAAGCTCGACTTGAGAGATGAAAGCCAACAAGTGAGCTTAGAACGTCTCATGACACAGCTCCTACAAGAGCGCAAGAGTGTTGGCACCTGCATTGAATGCTCTGCAGCTACGCTATACCAGGTCCCTGAAGTTTTTTATTTTGCTCAAAAAGCTGTACTGCATCCAGTAGATCCATTATTTGATCATGAAAGTCAAGCTTTAACAGATCAATGTGTTAGAGCGTTGAGAAGAATATTTGTTCTTTGTGATCGTGACATGGATGACGCCCTCAATGATGCAGAACTAAATGATTTTCAGGTTAGATGTTTCAATGCACCATTGCAGCCATCTGAAATTGAAGAGGTCAAAACAATTGTACGGCAGAAAGTAGTAGAAGGAATCAACTCACACGGTCTTACTTTTCCAGGATTTATGTGTATCCATAATATGTTCTTAAGAAAAGGGCGTCCAGAGGCATTTTGGTCTGTGCTAAGAAACTTTGGATATGATAATGATTTAAAACTCATGGATGATTTCCTTCCTGTCCCATCTAAGAGTTCTCCTGATCAGAGTGTGGAGCTGACAGGTGAAGCTGTAGAGTTTCTAAATGGCATCTTCCGACTATTGGATACTGATAAAGATCGAGCTTTAAGACCTGCTGAAGTGGATAAGCTATTTTGTACTGCTCCAGAAAGTCCATGGAATGATGCTCCATATAAGGATGCTGCTGAGAGAACTGATATGGGTTACTTATCTCTTAACGGATTTCTATCCCAGTGGGCACTTATGACATTACTTGATCCACTATGTAGCCTTGCAAATTTGATTTACATTGGATATAGTGGTAATCCTGCTGCGGCTCTTCGTGTTACTCGTAGGAGATCAGTTGATCGCAAAAGACAAGCGACAAAAAAGAATGTGTTCCAATGCTATGTTTTTGGTTCTAAAAAAGCCGGGAAATCTGCTCTGTTGGATGCATTATTGGGAAGGTCTTTCTCAAATAGTTATACTCCAACAACAGCTCAGAAGTTTGCTACAAATGCCATTGAATTGATAGGGGGAACTAGGAAAACTCTTGTATTGCGGGAGATACCAGAGAGTGAAGTATCGATAGTTCTGTCAAATCAGGATTATTTGGCAGCATGTGATGTAGCTGTTTTTGTGTACGACAGGTATGGTGCAAATGAATTTCCGTGTTCCATGCTTTGTTACAAAGCTCTAGGAGTGGTTGTTTTGCATTCTTGTGTTGCTTTCACCAACATATATTTATATATGGTACTATTAGTTAGTAAAAATAATGTATCAAAGACATGTTCGTTTCCCATATATGTGTTGTATGTAAATCAATTGCCTATGATGGCTTTGTTTGAGAGTCAggaggggaggaaggggaagtga 1740 0.4075 MTKSVTGQSGVRVVVAGDRGTGKSSLIAAIASDSFSDDVPSLLPPTLLSADFFPDNVPLTIIDTSSSLEKQNKRNEELKGADVVVLTYACNDSQSFLRLSSYWFRELQSLEVKAPVIVVGCKLDLRDESQQVSLERLMTQLLQERKSVGTCIECSAATLYQVPEVFYFAQKAVLHPVDPLFDHESQALTDQCVRALRRIFVLCDRDMDDALNDAELNDFQVRCFNAPLQPSEIEEVKTIVRQKVVEGINSHGLTFPGFMCIHNMFLRKGRPEAFWSVLRNFGYDNDLKLMDDFLPVPSKSSPDQSVELTGEAVEFLNGIFRLLDTDKDRALRPAEVDKLFCTAPESPWNDAPYKDAAERTDMGYLSLNGFLSQWALMTLLDPLCSLANLIYIGYSGNPAAALRVTRRRSVDRKRQATKKNVFQCYVFGSKKAGKSALLDALLGRSFSNSYTPTTAQKFATNAIELIGGTRKTLVLREIPESEVSIVLSNQDYLAACDVAVFVYDRYGANEFPCSMLCYKALGVVVLHSCVAFTNIYLYMVLLVSKNNVSKTCSFPIYVLYVNQLPMMALFESQEGRKGK 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02244 579 Pfam EF hand associated 227 310 IPR013567 -
Car03g02244 579 ProSiteProfiles small GTPase Rab1 family profile. 2 203 - -
Car03g02244 579 Pfam EF hand associated 348 415 IPR013566 -
Car03g02244 579 Gene3D - 289 479 - -
Car03g02244 579 PIRSF Miro 7 521 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0007005|GO:0031307
Car03g02244 579 SMART rab_sub_5 11 176 - -
Car03g02244 579 ProSitePatterns EF-hand calcium-binding domain. 204 216 IPR018247 -
Car03g02244 579 Gene3D - 183 287 - -
Car03g02244 579 SUPERFAMILY EF-hand 180 375 IPR011992 -
Car03g02244 579 PANTHER MITOCHONDRIAL RHO GTPASE 4 470 - -
Car03g02244 579 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 208 IPR027417 -
Car03g02244 579 ProSiteProfiles Miro domain profile. 8 175 IPR020860 GO:0003924|GO:0005525
Car03g02244 579 SMART ras_sub_4 12 176 - -
Car03g02244 579 PRINTS Transforming protein P21 ras signature 11 32 - -
Car03g02244 579 PRINTS Transforming protein P21 ras signature 151 173 - -
Car03g02244 579 PRINTS Transforming protein P21 ras signature 112 125 - -
Car03g02244 579 PANTHER RHO FAMILY GTPASE 4 470 IPR003578 GO:0005525|GO:0007264
Car03g02244 579 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 419 508 IPR027417 -
Car03g02244 579 Gene3D - 2 176 IPR027417 -
Car03g02244 579 SMART rho_sub_3 13 176 IPR001806 GO:0003924|GO:0005525
Car03g02244 579 Pfam Ras family 12 173 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02244 Car-Chr3 68411144 68420142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02244 4 504 EF-hand Containing Proteins AT3G63150 59.681 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02244 K07870 - gmx:100803790 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02244 03 68411144 68420142 Car04g00199 04 2046925 2060254 PCT