Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01327 atgtgTTTACGATCAACGCTGAACTTGTCTACAAATTCATACCTTTCTTTCAAGTTCAAAACTTGCGTTGCAAGTATCCTTCAGAAAAGAAAAAAATTGCATTGCAAGTATAAGGAAAAGGTAGCACAGGACTGTCAACTTCCTCATGAAGTGTTAGAATTCGTTTTCAAGAAACTAGATTTCGATGATCTCTTTCAATTTCTGAATGATTATTCTTTCTATAGCATACCTGACCAAAGAGCTTACTGCTTGAAGATGGATTGCTTATGGGGATTTTCCTATTCAGGGTCTTCTAGTGGATATCTAATTATGGCAGGTGCTAATGGTACACTTTTGCTGATGAACCCTTTTACAAGAAGAAAGAAGGTAATCAATACCACATCGCTTCAAGGTACATTATCTAATTTGGGTTGCCATGCCTTACTTGCTTTTGTCAAAGGTTCTGAAGAGTTTGTCATAGTGGCTTCGTGTACAAGTTATCACGGTTTGCATGTATATCAATCTCACAATTCTGGTTGGGTTACTTTTTCGATAAGGGGAGATACATGGTTGGCTAGTTGTGACAAGCAGCTTCTAGTGGTTCATTTTGAACCTGAGAAAGTATTGGACGTGTATAAGATAGACTTCTTAACCATGAATTATGTCAAGCTGGAAACTTTGGGTGACATTGCGTTTTTCTATTCTTTGTGGACAAACTGTCGTGTGCTGAGCAACCTGGGCAGGTGGAGATATGAGAGCAATTCTATGTATTGCATATGTTCATTTGCAGAATGTCATGTGTATTCAGGGGATGATAACAAACTGCAAAAATGTATAGTACCTTTTGATAGTCTTCAACCTCCTAGTAAATCAAGCTTCTACTGGCTGATTGGTGTTTTCCGCATCTACGTGATGAGGTCGCCGCTATACCAAATAAGTGCACCAAACAAAAGTTGGGGTCTCACTCAACTCATCTTCGCCGAAAACCCAAACAACTACCCGGAAAACGCACTCGGAGTTTCTCATCGCCCGGAAGAAACAATCAAAATGTCTCGAAGATATGATAGTCGTACAACAATATTCTCTCCTGAAGGACGGCTTTACCAAGTGGAGTATGCAATGGAGGCTATCGGAAATGCTGGTACTGCTATAGGAATCTTGTCCAAAGACGGAGTTGTTCTGGTTGGTGAAAAGAAGGTGACATCCAAGCTGCTGCAAACCTCAACTTCAACCGAAAAAATGTACAAGATTGATGATCATGTTGCATGTGCTGTTGCTGGGATTATGTCTGATGCCAACATCCTAATCAATACTGCTAGGATCCAAGCACAACGTTACTCATTTGCGTACCAAGAGCCAATGCCCGTTGAACAGTTGGTTCAATCTCTCTGCGATACCAAGCAAGGTTACACACAATTTGGTGGTCTCCGTCCATTTGGAGTCTCTTTCCTGTTTGCAGGCTGGGACAAAAATTTTGGCTTTCAACTTTACATGAGTGACCCTAGTGGAAACTACGGCGGTTGGAAAGCCGGTGCTATTGGTGCGAACAACCAAGCAGCACAATCAATTCTAAAACAGGACTATAAGGATGATATCACAAGGgaagaagcggttcaactcgcactgaaagtactgagtaaaactatggacagtactagtcttacctcagaAAAGCTTGAACTTGCAGAAGTTTTTCTTTCACCTGCCGGAAAAGTCAAGTATCAAGTCTGCTCCCCAGAGAACTTGACTAAGCTGTTGGTGAAGTCTGGTGTGACCCAACCAGCAACAGACACTGCTTAG 1779 0.3974 MCLRSTLNLSTNSYLSFKFKTCVASILQKRKKLHCKYKEKVAQDCQLPHEVLEFVFKKLDFDDLFQFLNDYSFYSIPDQRAYCLKMDCLWGFSYSGSSSGYLIMAGANGTLLLMNPFTRRKKVINTTSLQGTLSNLGCHALLAFVKGSEEFVIVASCTSYHGLHVYQSHNSGWVTFSIRGDTWLASCDKQLLVVHFEPEKVLDVYKIDFLTMNYVKLETLGDIAFFYSLWTNCRVLSNLGRWRYESNSMYCICSFAECHVYSGDDNKLQKCIVPFDSLQPPSKSSFYWLIGVFRIYVMRSPLYQISAPNKSWGLTQLIFAENPNNYPENALGVSHRPEETIKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARIQAQRYSFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKAGAIGANNQAAQSILKQDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPAGKVKYQVCSPENLTKLLVKSGVTQPATDTA 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01327 592 Pfam Proteasome subunit 372 556 IPR001353 GO:0005839|GO:0051603
Car03g01327 592 ProSiteProfiles Proteasome alpha-type subunit profile. 362 579 IPR023332 -
Car03g01327 592 PANTHER PROTEASOME SUBUNIT ALPHA TYPE-4-A 343 591 IPR034647 GO:0019773
Car03g01327 592 ProSitePatterns Proteasome alpha-type subunits signature. 347 369 IPR000426 GO:0006511|GO:0019773
Car03g01327 592 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 343 591 IPR029055 -
Car03g01327 592 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 346 561 IPR029055 -
Car03g01327 592 SMART Proteasome_A_N_2 347 369 IPR000426 GO:0006511|GO:0019773
Car03g01327 592 Pfam Proteasome subunit A N-terminal signature 347 369 IPR000426 GO:0006511|GO:0019773
Car03g01327 592 CDD proteasome_alpha_type_4 345 557 - -
Car03g01327 592 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 343 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01327 Car-Chr3 58191704 58198673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01327 K02728 - gmx:100793282 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01327 03 58191704 58198673 Car06g02462 06 27544383 27547438 PCT