Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01313 ATGCAGCACAACATCCTCAGCTCGATCCGTAGTACGAAAATCACGGATGGTTGTAAAGGCACTCAGGTCTACGCTCTTAACCCCTCCGCTGGCGCTCCGATCAACGGAGAATCCGTCGGTGATAAACTCTTTCATCATTTACTAGACCGGTCTAAACAACCCGGTCGAACAAAACCGGTTGGTACAAAAACGGCGACACGCGACGTCGTTTTGGAGGGTCTTCTCCCTTGTGGACTTCCCTCGTCGGAGCTTCTAGAACCTGGGATCGATCCTTGCTTGAAACCTATTGATTTGGTTGAAACCCTCGCCGGTGTTCATCGTCGGATCGAGAGTTGCGGCGAGCTTGAGAAATTCGAGGTGTTTTTGGAGCAGTGTTTAGTGTTCCGGGGAATTTCTGATGTCAAGTTGTTCCGGCGGAGTCTCCGGTCAGCGCGGCAGCATGCGGTGGATGTTCACTCGAAGGTTGTGTTGGCTTCGTGGTTGAGGTATGAGAGGAGAGAGGATGAACTTGTTGGATCTTCATCAATGGATTGTTGTGGAAGAAAACTTGAATGTCCTAAGGCTAGTTTGGTCCTAGGGTATGATCCTGAATCTGTTTTTGATCGTTGTTTGTGTTTTCGTAAAGACACGATTATTGTTGATAATGATGATGATGGGGAATGTGAATGCTCAACTTCTTATGAAGATGAGGATGTTGGTAGTTATAATGATATGTCTTTTTGTATAGGTGATAGTGAAATTAGGTGTAGTAGATATTCTATGGCGTCGCTTTCGAGGCCTTTTATGGCAATGTTGTATGGTGGATTTGTTGAGTCTAGGAAGGAGAAGATAAATTTCTCCCTCAATGGTGTTTCTGTTGAGGTGATGATGGCTGTTGAGGTTTTCAGTAGAACCAAGAGGCTGAATCAGTTTCCCAACAGTGTTGTATTAGAGATGCTTTCTTTTGCGAATAGGTTTTGTTGTGTGGAGATGAAATCTGCTTGTGATGCTCATTTAGCTTCTTTGGTATTGGACATGGATGATTCATTGTTGTTGATTGAGTATGGATTAGAGGAGACCGCGTATCTACTAGTTGCAGCTTGCTTGCAGGTGTTTCTGAGAGAGCTCCCTGGTTCGATGCACCGTTTGAGTGTTATGAGATTGTTTTGTAGTGTAGAGGGTAGGGATAGGTTGGCCTTGGTAGGGCATGTGTCGTTTTCGTTGTATTGTTTTTTGAGTCAGGTTGCGATGGAGGAAGATATGAAATCTAACACAACTGTGATGATCTTAGAACGGTTAGGAGAGTGTGCGGCGAGTGGTTGGCAGAAACAACTTGCTTATCACCAATTAGGTGTTGTGATGCTTGAGAGAAATGAATACAAAGATGCTCAACATTGGTTTGAAGCTGCTGTTAAGGAAGGACATATTTATTCTTCAGTTGGTGTTGCGAGGGCCAAATATAAGCGCGCTCACACGTATTCGGCATACAAGATGATAAACTACCTTATTTCTGCTCATAAACCTGTTGGTTGGATGTATCAGGAAAGGTCTTTGTATTGCATTGGGAAGGAAAAAACGATGGACTTGGTCTCTGCAACTGAATTAGATCCAACTCTTTCTTTTCCATACAAACACCGGGCTGTTTGTTTGGTGGAGGAGGGTAAGATTGGAGCTGCCATTTCTGAAATCAATAAAATAATTGGTTTCAAGATTTCTCCTGACTGCCTTGAATTGAGAGCTTGGTTCTTGATTGCCATGAAGGATTATGAAGGAGCTCTCAGGGATGTCAGGGCAATTTTGACATTAGATCCAAATTATATGATGTTTTATGGGAATATGCAAGGTTACCGCGTGGTAGAACTCCTCCGCCCTGTTGCTCAGCAGTGGAACCAGGCTGATTGTTGGATACAATTGTATGACAGATGGTCTTCTGTTGATGATATTGGTTCTTTAGCTGTTGTACACCATATGTTAGAAAACAACCCAGGGAAAAGTATTTTACGCTTTCGGCAATCTCTACTTCTTTTACGGTTAAATTCTCAAAAGGCAGCCATGCGTAGTTTGCGTCTGGCTAGAAATCATTCTTCTTCAGCACATGAAAGACTTGTCTATGAAGGATGGATATTGTATGACACTGGTCATCGTGAAGAAGCTATAGCAAAGGCTGAGGAGTCGATTTCTATTCAAAGGTCATTTGAAGCTTTCTTTCTCAAAGCTTATGCATTAGCTGACTCATGTCTTGATTCAGAATCTTCAAAGAATGTGATTGATCTCTTGGAGGAAGCTCTAAAATGCCCTTCAGATGGTCTTCGTAAGGGACAAGCACTAAATAATTTAGGGAGTATATATGTAGATTGCGAAAAGCTAGACCTTGCTGCTGACTGCTACAAACATGCACTTAACATCAAGCATACTCGAGCACATCAGGGGTTGGCACGTGTATATCATCTTCAAAATCAGCACAAAGCGGCATATGATGAGATGACGAAGCTAATAGAGAAGGCCCAGAATAATGCATCAGCTTATGAGAAACGTTCAGAATATTGCGATCGTGACATGGCAAAGAGCGATCTTAGCTTGGCTACACAGTTGGATCCTTTAAGGACATATCCGTACAGATATAGGGCGGCAGTTTTAATGGATGATCATAAGGAAGCCGAAGCAATATCAGAGCTATCAAGGGCCATCAACTTTAAGCCAGAACTGCAACTGTTACATCTTCGAGCAGCATTTTATGATTCAATGGGTGATTTTGTTTCTACTGTCCGAGACTGTGAAGCAGCCCTGTGTCTTGATCCTAGCCATGCTGAGATGTTAGAGCTTTGTAATAAAGCCCGGGGACGAATTAATGATGGAAAGTGA 2841 0.4298 MQHNILSSIRSTKITDGCKGTQVYALNPSAGAPINGESVGDKLFHHLLDRSKQPGRTKPVGTKTATRDVVLEGLLPCGLPSSELLEPGIDPCLKPIDLVETLAGVHRRIESCGELEKFEVFLEQCLVFRGISDVKLFRRSLRSARQHAVDVHSKVVLASWLRYERREDELVGSSSMDCCGRKLECPKASLVLGYDPESVFDRCLCFRKDTIIVDNDDDGECECSTSYEDEDVGSYNDMSFCIGDSEIRCSRYSMASLSRPFMAMLYGGFVESRKEKINFSLNGVSVEVMMAVEVFSRTKRLNQFPNSVVLEMLSFANRFCCVEMKSACDAHLASLVLDMDDSLLLIEYGLEETAYLLVAACLQVFLRELPGSMHRLSVMRLFCSVEGRDRLALVGHVSFSLYCFLSQVAMEEDMKSNTTVMILERLGECAASGWQKQLAYHQLGVVMLERNEYKDAQHWFEAAVKEGHIYSSVGVARAKYKRAHTYSAYKMINYLISAHKPVGWMYQERSLYCIGKEKTMDLVSATELDPTLSFPYKHRAVCLVEEGKIGAAISEINKIIGFKISPDCLELRAWFLIAMKDYEGALRDVRAILTLDPNYMMFYGNMQGYRVVELLRPVAQQWNQADCWIQLYDRWSSVDDIGSLAVVHHMLENNPGKSILRFRQSLLLLRLNSQKAAMRSLRLARNHSSSAHERLVYEGWILYDTGHREEAIAKAEESISIQRSFEAFFLKAYALADSCLDSESSKNVIDLLEEALKCPSDGLRKGQALNNLGSIYVDCEKLDLAADCYKHALNIKHTRAHQGLARVYHLQNQHKAAYDEMTKLIEKAQNNASAYEKRSEYCDRDMAKSDLSLATQLDPLRTYPYRYRAAVLMDDHKEAEAISELSRAINFKPELQLLHLRAAFYDSMGDFVSTVRDCEAALCLDPSHAEMLELCNKARGRINDGK 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01313 946 Gene3D Tetratricopeptide repeat domain 423 606 IPR011990 GO:0005515
Car03g01313 946 Pfam Tetratricopeptide repeat 767 795 IPR019734 GO:0005515
Car03g01313 946 PANTHER ETO1-RELATED 1 944 IPR044631 GO:0010105
Car03g01313 946 SUPERFAMILY POZ domain 233 333 IPR011333 -
Car03g01313 946 Gene3D Tetratricopeptide repeat domain 839 945 IPR011990 GO:0005515
Car03g01313 946 Gene3D Tetratricopeptide repeat domain 660 829 IPR011990 GO:0005515
Car03g01313 946 SUPERFAMILY TPR-like 749 934 IPR011990 GO:0005515
Car03g01313 946 Coils Coil 811 838 - -
Car03g01313 946 SMART tpr_5 800 831 IPR019734 GO:0005515
Car03g01313 946 SMART tpr_5 566 599 IPR019734 GO:0005515
Car03g01313 946 SMART tpr_5 895 928 IPR019734 GO:0005515
Car03g01313 946 SMART tpr_5 692 725 IPR019734 GO:0005515
Car03g01313 946 SMART tpr_5 766 799 IPR019734 GO:0005515
Car03g01313 946 SUPERFAMILY TPR-like 647 795 IPR011990 GO:0005515
Car03g01313 946 ProSiteProfiles TPR repeat profile. 766 799 IPR019734 GO:0005515
Car03g01313 946 SUPERFAMILY TPR-like 439 605 IPR011990 GO:0005515
Car03g01313 946 Gene3D Potassium Channel Kv1.1; Chain A 231 374 IPR011333 -
Car03g01313 946 PANTHER ETHYLENE-OVERPRODUCTION PROTEIN 1 1 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01313 Car-Chr3 58056885 58065793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01313 767 930 Glycosyltransferase AT3G04240 29.143 3.30e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01313 - - qsu:112033922 1395.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01313 03 58056885 58065793 Car03g01313 03 58056885 58065793 ECH
Car03g01313 03 58056885 58065793 Car06g02471 06 27779931 27784662 PCT