Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02090 ATGTGTAAACCACGCGCTCTCTCTGCTACACTCCCTCTGCTTCTTCTTCTTCTAAACTCTCTTTTTCTAACTCTTGTTTCTGCTCAAACTAACAAGAGATCTGATTGGAATACACTTACCGGTAATCCACCGTTGGTCATAGCACATGGTGGTTTTTCGGGGATATTTCCCGATTCAAGTGGTGCTGCTTATAGTTTGGCCTTACAAACGAGCTTACCGGATGTTGCTCTATGGTGTGATGTGCAATTGACAAAAGATGCAGCTGGGATTTGCCTTCCAAATGTCAACCTTTTAAATTCTACTTACGTTTCAATTGCTATCCCAAATAAAACTACGAGTTACTCGGTTAATGGTGTATCCACCCGTGGCTATTTTTCCGTGGATTACACCTTGGAGGACTTATCCAATGTCTTCTTATCTCAGGGAGTATTTTCTCGGTCAGCTCTGCTTGATGCCAATGGTTATTTAATTCTTACTGTTGATGATGTAGTCAAATCAGTGGCGCCACAAAAACCAAATCTGTGGTTGAATATTCAGCATGATGCGTTCTATACACAGCACAAGTTGAGCATGAGAAGCTATGTACTTTCAGTTTCTAGAAGAGTGCCTGTCAGTTATATCTCATCGCCCGAGGTTGGTTTTCTGAGAAGTATTACAACACGCTTCGACCCAAAAATAACGAAACTTGTCTTCAGGTTTCTCAATCAGGACGATACAGACCCATCAACCAATCAAACTTATGGTTCACTATTAAAAAATCTTACGTTTATCAAGACATTTGCTTCCGGAATTCTTGTTCCCAAGGAATACATATGGCCTGTAGATGCTAGTCTTTATCTACAACAACATACCACTTTGGTTTCAGATGCACATAAAGCTGGGCTGGAAGTTTATGCATCAGATTTTTCAAATGATGTTGTAAATAGCTATAATTACAGTTATGATCCTCTTGCTGAGTACCTTCAATTCATCGATAATGGTGACTTCTCTGTTGATGGTGTGCTGACTGATTTTCCCATAACTCCATCCGAAGCTATAGGTTGCTTTGCTCACCTAGGTGCCAATGCTACACGAAAAGATAAAACATTGATTATCTCAAAATATGGAGCAAGTGGAGATTATCCAGCTTGTACTGACTTGGCATATAAAAATGCCATATTAGATGGTGCGGATGTTCTTGACTGTCCTGTTCAAATATCAAAGGATGGAATACCATTTTGCTTAAGCTCCATTGATCTTTTTGAGAGTACCAACGTTGCTCAATCAAGCTTCAGCGGATATGCCATGACTATCCCTGAGATTAAATCTAGCAGTGGCATATTCACATTCAACTTGACATGGGCTGATATAAAAGGCCTGACCCCCTCAATAATCAACCCTTATACAAAATACACATTGTTCAGGAATCCAAAATATAAGAAAGCTGGGACATTTGTAACATTATCAGATTTCTTATCGTTGACAAAAAATCATACTTCTCTATCTGGAGTCTTGATCATAGTTGAGAATGCAGCCTATCTTGCAGAAAACCAAGGATTTAGTGTGACCGATAAGGTCATTGATGCTTTGCGCAAAGCAGGTTATGATAAACCAGGGAGCCAAAAGGTTTATATTCAATCCACTAATAGCTCTGTACTTCTGAAATTCAAGGAGAAAACCAATTACGAGCTTGTCTACAAGATTGACGAGACTGTCAGTGATGCTGCCAACGCAGCTGTTGAGGATATAAAAACGTTTGCGGGTTCTGTGGTTATCAACAAGGACTCGGTATTTCCTCAGAATAGTGGCTTCATAACGGGAGCTACAAATACTGTGCCAAAGCTTCAAGCTTCTAATCTCTCAGTTTTTGTAGAAACATTCAGCAATGAGTTTGTATCTCAAGCGTGGGATTTCTTCTCAGATTCAACTGTGGAGATCAACTCATATATTCAGGGAGCAGGAATTGATGGGGTCATCACAGACTTCCCTAAAACTGCTAGTAGATACTCAAGAAACAAATGCTTAAACTTGGGAAAGAACACACCTCCTTACATGGAAGCTGTTGAAACAGGTGGTCTTTATTCAATCATTAGCCCTCAATCATTGCCTCCAGCTCTGGCTCCAATCCCACCGTTGACAAAATCTGAAGTGGTAGAGCCACCTTTGCCTTCTGTTGTTGCTGAATCAGCCCCAGCTTCTAGCCCTGCTGCCGGAACCAAGTCGCCACCTGGAAATGCGCAACCTAAGGTTACTGTCTGTTTCTTCTTATCCAGTATGGCTGTGTTTGTTGCTTCTCTTCTTCTGCTTTGA 2289 0.408 MCKPRALSATLPLLLLLLNSLFLTLVSAQTNKRSDWNTLTGNPPLVIAHGGFSGIFPDSSGAAYSLALQTSLPDVALWCDVQLTKDAAGICLPNVNLLNSTYVSIAIPNKTTSYSVNGVSTRGYFSVDYTLEDLSNVFLSQGVFSRSALLDANGYLILTVDDVVKSVAPQKPNLWLNIQHDAFYTQHKLSMRSYVLSVSRRVPVSYISSPEVGFLRSITTRFDPKITKLVFRFLNQDDTDPSTNQTYGSLLKNLTFIKTFASGILVPKEYIWPVDASLYLQQHTTLVSDAHKAGLEVYASDFSNDVVNSYNYSYDPLAEYLQFIDNGDFSVDGVLTDFPITPSEAIGCFAHLGANATRKDKTLIISKYGASGDYPACTDLAYKNAILDGADVLDCPVQISKDGIPFCLSSIDLFESTNVAQSSFSGYAMTIPEIKSSSGIFTFNLTWADIKGLTPSIINPYTKYTLFRNPKYKKAGTFVTLSDFLSLTKNHTSLSGVLIIVENAAYLAENQGFSVTDKVIDALRKAGYDKPGSQKVYIQSTNSSVLLKFKEKTNYELVYKIDETVSDAANAAVEDIKTFAGSVVINKDSVFPQNSGFITGATNTVPKLQASNLSVFVETFSNEFVSQAWDFFSDSTVEINSYIQGAGIDGVITDFPKTASRYSRNKCLNLGKNTPPYMEAVETGGLYSIISPQSLPPALAPIPPLTKSEVVEPPLPSVVAESAPASSPAAGTKSPPGNAQPKVTVCFFLSSMAVFVASLLLL 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02090 762 Gene3D Phosphatidylinositol (PI) phosphodiesterase 43 345 IPR017946 GO:0006629|GO:0008081
Car02g02090 762 Gene3D Phosphatidylinositol (PI) phosphodiesterase 361 662 IPR017946 GO:0006629|GO:0008081
Car02g02090 762 CDD GDPD_SHV3_repeat_2 363 662 - -
Car02g02090 762 SUPERFAMILY PLC-like phosphodiesterases 42 345 IPR017946 GO:0006629|GO:0008081
Car02g02090 762 ProSiteProfiles GP-PDE domain profile. 362 663 IPR030395 GO:0006629|GO:0008081
Car02g02090 762 SUPERFAMILY PLC-like phosphodiesterases 361 662 IPR017946 GO:0006629|GO:0008081
Car02g02090 762 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 15 761 - -
Car02g02090 762 ProSiteProfiles GP-PDE domain profile. 44 346 IPR030395 GO:0006629|GO:0008081
Car02g02090 762 Pfam Glycerophosphoryl diester phosphodiesterase family 369 658 IPR030395 GO:0006629|GO:0008081
Car02g02090 762 CDD GDPD_SHV3_repeat_1 44 345 - -
Car02g02090 762 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 15 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02090 Car-Chr2 51260089 51264937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02090 8 762 Receptor kinase-like Gene Family AT4G26690 55.746 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02090 - - gmx:100792750 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01072 05 52303255 52309081 Car02g02090 02 51260089 51264937 PCT