Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01722 ATGGAAATTACAGAACAGCCCTCTCTTTCCAAACCCAACAACACTCACACTCCACACTCCACCAATGCCGATTCACAACACCAAAACCCTgaagaagaaaacgacgatatcgacgatgaagaagaagaagaagaagaatatgacgacaacgacgaagacgaagaGCAAAATCAGAATATTCCCCAATCCACAGAATCCAAATTGCGCGAACAGCGTTTCAAGGTTGAAGCCTTTTCCCGTCGATTATCATCGGAACTAGTTCCAATTCGAGTCCACGATATTTTGATTAACGGAAACACGAAGACTAAAGATTGGATTATTGAAGCCGAACTCGAAGGGATCGAGAATGCGACTACAGTGCAGGAACTCATGCAAGCTTCGCAAATCGCTATTGCGAGGCTTCAAGGGCTTGAAATCTTTGATTCGTGTAAGGTTAAGCTTGAAGCTGGACCAGCGGAATTGCCGAATACTGCTAATGTTATTGTTGATGTTGTTGAGAGTGATGGAAAGCTTTCTGGTGAAGGCGGTGTTTATATGAAACCCTCGACTAGTACATGGACTGCTGAAGGAACTGTTAAATATAAGAATATTTTTGGTTATGGTGATCTATGGGATGCTTCTTTGGCCTATGGTGGGAACCAAGCGACTGAGATGAGCTTTGGGGTGTATGCGCCTCACCTGAAAGGATTTTTAACTCCTATTGTGGCACGAATGTTCATGCTTTCTCAAGACTGGCAGGAGTTTTCTTCTTACAAAGAGCAGTTGTTAGGCACATCTCTTGGCTTGATATCGACAAAGCACCATGACTTGGTATACACTCTTGGTTGGCGTACCTTAACAGATCCATCACAAATGTCATCTGAGTCTATAAGGAGGCAGCTTGGCCATGGGTTACTGTCGTCTTTGAAATATACATATAAATTTGATAGGAGAGACTCGCCCATTAGACCTACAAAAGGATATGCTTTTGTTTCTACCACTCACTTTGGTGGTCTTACACCGGATCCCCGGAGCTTGCGGTTTCTGCGCCAGGAGCTTGATGTTCGCTTTGCCATCCCTTTTGGATTTTATAATACAGCACTGAACCTTGGCATATCTGCTGGGGCCGTTTTTCCATGGGGGCAAGGGTTCAGGAGCAAGCCATCTCCACTCCCCGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGCACCTTAGGAGGACCAAGAACATTATGGGGATTTAAAACTAGGGGAGTAGGTCCTACTGAACCGCGAAGGCAAAGAAGAGATGAAGCAGATGATGACGATGGTGGTTCCTCTACCCGTGACTTCATTGGAGGAGATCTTGCTGTTACTGCTTTTGCAGACCTCTCTTTTGATCTTCCTATTAGGTGGTTGAGAGAACAGGGAATACATGCACACATTTTTGCTGGTTCCGGGAATACAGCTAAATTAACTCAGGACGAGTACAAACATTTTACTCCTCGGAAGTTCTTAGACTCCTTCCGGTTGTCCGTCGGATGTGGAATTGTTATTCCTACTAGTCTCTTCCGCCTAGAGGGTAACTACTTGCACGTGCTTAGGAAGGATGAGCATGATCGCGGGAAGGCTGGGTTTAGGTTCAGCTTCTCAGCTCCTTCGTAG 1629 0.4322 MEITEQPSLSKPNNTHTPHSTNADSQHQNPEEENDDIDDEEEEEEEYDDNDEDEEQNQNIPQSTESKLREQRFKVEAFSRRLSSELVPIRVHDILINGNTKTKDWIIEAELEGIENATTVQELMQASQIAIARLQGLEIFDSCKVKLEAGPAELPNTANVIVDVVESDGKLSGEGGVYMKPSTSTWTAEGTVKYKNIFGYGDLWDASLAYGGNQATEMSFGVYAPHLKGFLTPIVARMFMLSQDWQEFSSYKEQLLGTSLGLISTKHHDLVYTLGWRTLTDPSQMSSESIRRQLGHGLLSSLKYTYKFDRRDSPIRPTKGYAFVSTTHFGGLTPDPRSLRFLRQELDVRFAIPFGFYNTALNLGISAGAVFPWGQGFRSKPSPLPERFYLGGDFSPVCTLGGPRTLWGFKTRGVGPTEPRRQRRDEADDDDGGSSTRDFIGGDLAVTAFADLSFDLPIRWLREQGIHAHIFAGSGNTAKLTQDEYKHFTPRKFLDSFRLSVGCGIVIPTSLFRLEGNYLHVLRKDEHDRGKAGFRFSFSAPS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01722 542 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 24 540 - -
Car02g01722 542 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 24 540 IPR039910 -
Car02g01722 542 Coils Coil 37 57 - -
Car02g01722 542 MobiDBLite consensus disorder prediction 1 68 - -
Car02g01722 542 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 181 540 - -
Car02g01722 542 MobiDBLite consensus disorder prediction 1 27 - -
Car02g01722 542 Pfam Omp85 superfamily domain 196 539 IPR000184 GO:0019867
Car02g01722 542 Gene3D membrane protein fhac 88 167 - -
Car02g01722 542 MobiDBLite consensus disorder prediction 416 436 - -
Car02g01722 542 MobiDBLite consensus disorder prediction 31 58 - -
Car02g01722 542 MobiDBLite consensus disorder prediction 409 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01722 Car-Chr2 46324296 46328140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01722 K07277 - gmx:100802876 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01722 02 46324296 46328140 Car02g01722 02 46324296 46328140 ECH
Car05g01488 05 59185550 59192840 Car02g01722 02 46324296 46328140 PCT