Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01106 ATGGCAATGAAAACAAAAAGCAACAAGATGGGGAATGAATTGGGTTGTGGTTTAATGGAGAAAATTTTCCATCTCAAAAGCCCCAAGCTAAAAAACTCATTAGTTCATTCCCTACCCATGATGAAGACTAGCAACATTGATCACGTCATAACTGAACAAAAAATGTCTCCAAATAATGAACAAAAGGTTCCTCAAAGAATCTCCATCAACACTGAACTCAGTAAGCCAAGCACACTAAGTGTTGACCACAGTCAATATAAGACTAATCACTCACACTTGAATTTCAACAACAAAAACACCAGAAAGAGTAGTTTCTCTATTCATGAAACAAATCGGAAAAATATTTTAGATGCTACTTCAAGAAACTCAACATCATCATCGTCGACCAGTAGTTCAACCAACAAAAGTGTTCACCAAAACCATAATACTAATGATGATAGCAAACTTAAAATAGAACCAACAGCAAGTTCTCTACAACTTGCTAGAATAAAAACTTTTCACAAGCAAGACAATGAGAGTAACAATTTTCACAATAGTAATGGAATAAAAGGGGTGATGGGGAATATCATGAGGAAGAACAGTAATGAACTTGCACAGTTTCTAAGTCAAAGCCACAAAAGTTTAGACCCTGAAGTGTTGAAAACTATGGGAAATGAAAAATACAAAAAGGGTAGATTTGAAGAGGCTTTGGCTTTGTATGATAAAGCAATTGCACTTGACTCAAATAAAGCAACTTATCATTGTAACAAGAGTGCAGCTTTAATTGGATTAGGAAGGTTTCAAGAAGCAATTTTTGAGTGTGAGGAATCTATCCGGTTGGAGCCTTCTTATAATAGAGCTCATAATCGTTTGGCAACAATATATTTCAGAATAGGAGAATTCGAAAAGGCACTGGATTGCAACAGATCAACTACATATGTTGATTCTGTACTTGCTTTCCAAGCCAGGGCTCTAAAAAGCCACCTTAACAAATGCATTGATGCTAGAAAATTCAATGAATGGGGTGTTATACTTAGGGAAACACAGTCTGCATTATCCTTAGGTGCTGATTCAGCTCCACAGATCTATGCTTTACAAACTGAAGCCTTGATGAAGCTTCTAAGATATCAAGAGGCATATACCAGTTATGATAAAATGCCAAAATTTTCACTTGATTGGTGTAACCAGATATTTGGCATGGCTACTAGCGCTTACCTGTTGATGATAGGGGCACAGGTTTACTTGGCATCCGGCAGGTTTGAGGATGCTGTAACAACAGCTCAGCAAGCAGCAAGAGTTGATCCAACCAACAGAGAGGTGAATGCAGTGTTAAGGAGATCCAGGGCAGTGAGCTCGGCTAGAATGAGTGGAAACTTGCTCTTCAAGGCATCCAAATTCATGGAAGCATGTGCAGTATACAATGAAGGACTAGAGCATCATCCACACAACTCAGTTCTTCTTTGCAATAGAGCAGCATGTCGTTCTAAGTTAAGCCAATATGAAAAAGCAATTGAAGATTGTAATGCTGCACTTATGCTTCATCCTTGTTATAGCAAAGCAAAGCTAAGGAGGGCATATTGCAATGCCAAGTTGGAACGATGGGAAGTCGCCATTCAAGACTATGAAATGCTGATAAGAGAAAAGCCAGGGGATGAAGAAGTAGCCAAGGCTTTGTTTGAGGCTCAGCTCCAACTCAAGATTCTACATGGTGAAGATATTAAGGATTTGAAATTTGGTTCAAATTTGGTTTTTATCTCAAGTAATGAACGTTTCAGACATTATGTAACCTCACCTGGTATGGCTGTAGTGCTTTTTAGTAACAAGGGAACACACAAACAAGTGTTGTTGATGTTGGAGCAAACCAGCAAGAAATTTCCATCTGTTAATTTCCTAAAGGTAGAGATTGAAGACCACCCTTACATGGCAAAATCAGAAGGTGTAAGCTCATTTCCAGCATTCAAAATATACAAGAATGGATCAAGGGTTAAAGAGATTTCAGGAAACAACCATGAGTTGGACCTCAATAGCCAACTTTTATTCTCTCTCCCTGGCCCCACTTTTCCTTCCATGTTCCTATCAATGCCACCCTCTTATAACCAACCTTGTCCTCAAGGTTGGAAGTGGTTGTTATCGTTCCTATTGCCCTTAGGAGATCCTTCAACTCGCCTGAGGCATAAACAAGAACTGGGTTGCTCAGGACACTAA 2184 0.3887 MAMKTKSNKMGNELGCGLMEKIFHLKSPKLKNSLVHSLPMMKTSNIDHVITEQKMSPNNEQKVPQRISINTELSKPSTLSVDHSQYKTNHSHLNFNNKNTRKSSFSIHETNRKNILDATSRNSTSSSSTSSSTNKSVHQNHNTNDDSKLKIEPTASSLQLARIKTFHKQDNESNNFHNSNGIKGVMGNIMRKNSNELAQFLSQSHKSLDPEVLKTMGNEKYKKGRFEEALALYDKAIALDSNKATYHCNKSAALIGLGRFQEAIFECEESIRLEPSYNRAHNRLATIYFRIGEFEKALDCNRSTTYVDSVLAFQARALKSHLNKCIDARKFNEWGVILRETQSALSLGADSAPQIYALQTEALMKLLRYQEAYTSYDKMPKFSLDWCNQIFGMATSAYLLMIGAQVYLASGRFEDAVTTAQQAARVDPTNREVNAVLRRSRAVSSARMSGNLLFKASKFMEACAVYNEGLEHHPHNSVLLCNRAACRSKLSQYEKAIEDCNAALMLHPCYSKAKLRRAYCNAKLERWEVAIQDYEMLIREKPGDEEVAKALFEAQLQLKILHGEDIKDLKFGSNLVFISSNERFRHYVTSPGMAVVLFSNKGTHKQVLLMLEQTSKKFPSVNFLKVEIEDHPYMAKSEGVSSFPAFKIYKNGSRVKEISGNNHELDLNSQLLFSLPGPTFPSMFLSMPPSYNQPCPQGWKWLLSFLLPLGDPSTRLRHKQELGCSGH 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01106 727 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 665 IPR044534 -
Car02g01106 727 MobiDBLite consensus disorder prediction 112 140 - -
Car02g01106 727 Pfam Tetratricopeptide repeat 280 302 IPR019734 GO:0005515
Car02g01106 727 MobiDBLite consensus disorder prediction 112 151 - -
Car02g01106 727 Gene3D Tetratricopeptide repeat domain 209 561 IPR011990 GO:0005515
Car02g01106 727 ProSiteProfiles TPR repeat profile. 397 430 IPR019734 GO:0005515
Car02g01106 727 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 665 - -
Car02g01106 727 ProSiteProfiles TPR repeat profile. 210 243 IPR019734 GO:0005515
Car02g01106 727 SUPERFAMILY Thioredoxin-like 526 663 IPR036249 -
Car02g01106 727 CDD TRX_family 582 671 - -
Car02g01106 727 Pfam Thioredoxin 581 669 IPR013766 -
Car02g01106 727 SUPERFAMILY TPR-like 209 432 IPR011990 GO:0005515
Car02g01106 727 SUPERFAMILY TPR-like 448 559 IPR011990 GO:0005515
Car02g01106 727 Gene3D Glutaredoxin 570 672 - -
Car02g01106 727 Pfam Tetratricopeptide repeat 404 476 - -
Car02g01106 727 Pfam TPR repeat 217 252 - -
Car02g01106 727 SMART tpr_5 477 510 IPR019734 GO:0005515
Car02g01106 727 SMART tpr_5 511 544 IPR019734 GO:0005515
Car02g01106 727 SMART tpr_5 443 476 IPR019734 GO:0005515
Car02g01106 727 SMART tpr_5 278 311 IPR019734 GO:0005515
Car02g01106 727 SMART tpr_5 397 430 IPR019734 GO:0005515
Car02g01106 727 SMART tpr_5 210 243 IPR019734 GO:0005515
Car02g01106 727 SMART tpr_5 244 277 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01106 Car-Chr2 30881463 30886129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01106 213 326 EF-hand Containing Proteins AT2G32450 28.070 4.16e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01106 K09527 - gmx:100791862 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01106 02 30881463 30886129 Car02g01106 02 30881463 30886129 ECH
Car02g01106 02 30881463 30886129 Car05g01606 05 60759226 60763301 PCT