Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00704 ATGTTACCTCCTGGATCAGTTCCTATAAAGGACTATGCAATAGAGACACCCTTGAAGGATCTATCTTTATCTGCTGAAGATGATACCTTTCATGAAATCAGGATTGATCTCAAACCCAACGATCACATTTCAGCAATTAATTTTGTACTCAAGGATGAGGAAACTGGAGCTTGGTATCGAAATAAAGGAAGAGACTTCAAAGTTCCTTTGATCAACTACCTTAAGACAGAAACTAATACAATTGAACCTAAAAGAGGCTTGACTTTATGGCCAGGTTTCTCAAAGCATTCTTCTTTTGAAAAGTGGATCTTGTTTTTCTTTTTAATGCTCTTCAAGTCGAGAGCGGGACAAGATGACAGCAGTGAATCCATAGATCCTAAACAAGAAAATGATCAACTTGAAGGTTATAATGTAGAAATTCCTATTACAAAGAAGGTTCTTATCAATAACTTCATTAGTGTTTCTGTTAAGAAATACTTTGAATCTGAGGAAGTTAAGAATCTTTTATATCTTGAAACGGATCTACCTGGAGATGTTGCGCTTCATTGGGGAGTTTGCAGGGATGATTCAAGAAAGTGGGAAGTTCCACCTGCTCCGCATCCGTCAGAAACTGTAAAATTTAAAGACAAAGCTTTGAGAACTCAATTTAAGCCGAGAGGAAACGGACAAGGATCTTCAGTACAAATCACTTTAGGAGAAGAATTTTCAGGATTCCTTTTTGTTCTTAAGCAAAATGAAAATGCTTGGTTTAAGTACAAAGGAAATGACTTTTATATCCCACTCTCAAGTTCTAGTAACTTACTTATTAATGGCATCGGAGAGTATGAGTCAGAAGGtgtgaagaaggaaataactgaagaggcaatccagaagacttctttctttcaatttACCAATGGAACTGTCAATGAAATAAAGAATGTGGTGGCAGAAAATTCCTCTGAGAGTGGAAAGGTTAAATCCAAAGAAGTCCAAAATAGCATTCTTCAAGAAATTGAAAGACTGGCTTCTGAAGCCTATAATTTCTTCAGAAGCTCCATTCCAACTTTCTCGGAGGCAACTACGGTGGAACATCGTGAAACAACTATTGTGGAACGCGAAGCAGCGATTGTGGAACCTGAAGCTACTGTGCAATCGGAGAAACTGACCCATGATATAAAAATATGCTCAGCCACAGGATCAGGATATGAAATAATATGCCAAGGGTTTAACTGGGAATCTCATAAATCTGGAAGATGGTACATGGAGCTGAAAGAGAAAGCTTCAGAACTATCATCACTTGGCTTCACTTTGGTTTGGTTACCACCACCTACGGAGTCCGTTTCACCTGAAGGATACATGCCAAAGGATTTATTTAATTTGAATTCGAGATATGGAAACATAGGTGAACTAAAAGATTTGGTGAAAAGATTTCATGAAGTTGGGATCAAAGTTCTAGGAGACGCCGTTTTAAATCACCGTTGTGCTCACTATCAGAATCAGAATGGTATATGGAACATATTTGGAGGCCGTCTCAACTGGGATGACCGTGCAGTTGTAGCAGATGATCCACATTTTCAGGGTAGGGGCAACAAGAGTAGTGGAGATAATTTTCATGCTGCTCCAAACATTGATCATTCGCAGGAATTTGTGAGAAAGGATCTCAAAGAATGGCTGTGCTGGTTGAGGAAAGAAGTTGGGTATGATGGATGGAGGCTTGACTTTGTTAGAGGATTTTGGGGTGGTTATGTAAAGGATTACCTTGATGCAAGTGAACCTTACTTTGCAGTTGGAGAGTATTGGGATTCCCTTGGTTATTCGTATGGTGAAATGGATTATAATCAAGATGCTCATAGGCAGAGGATAATTGACTGGATCCGTGCCACCTCCGGTACGGCTAGTGCATTTGATGTTACGACGAAAGGGATTCTTCACTCGGCATTGGAAAAATGTGAATATTGGCGATTGTCAGATCAGGAGGGAAAACCCCCTGGAGTTGTTGGGTGGTGGCCGTCTCGTGCTGTTACCTTTATAGAAAATCATGACACTGGTTCCACTCAGggtcattgGAGATTTCCTAGCGGAAAAGAAATGCAAGGCTATGCTTACATTCTTACTCACCCAGGAACACCATCAGTGTTTTTTGACCACATTTTGTCTCACTATAAAACTGAAATAGAAGCTCTTGTATCTATCAGGAAGAGGAACAAGATCCATTGCAGGAGTACAGTTGAAATTAGTAAGGCAGAGAGGGATGTTTATGCCGCCATCATCGATGAAAAAATCGCGATGAAGATTGGACCTGGACATTTTGAACCCTCTAGTACCTTCCACAAATGGTCCCTTGCTATTGATGGAAAAGACTATAAGATTTGGGAAGCATCATCATAA 2370 0.3886 MLPPGSVPIKDYAIETPLKDLSLSAEDDTFHEIRIDLKPNDHISAINFVLKDEETGAWYRNKGRDFKVPLINYLKTETNTIEPKRGLTLWPGFSKHSSFEKWILFFFLMLFKSRAGQDDSSESIDPKQENDQLEGYNVEIPITKKVLINNFISVSVKKYFESEEVKNLLYLETDLPGDVALHWGVCRDDSRKWEVPPAPHPSETVKFKDKALRTQFKPRGNGQGSSVQITLGEEFSGFLFVLKQNENAWFKYKGNDFYIPLSSSSNLLINGIGEYESEGVKKEITEEAIQKTSFFQFTNGTVNEIKNVVAENSSESGKVKSKEVQNSILQEIERLASEAYNFFRSSIPTFSEATTVEHRETTIVEREAAIVEPEATVQSEKLTHDIKICSATGSGYEIICQGFNWESHKSGRWYMELKEKASELSSLGFTLVWLPPPTESVSPEGYMPKDLFNLNSRYGNIGELKDLVKRFHEVGIKVLGDAVLNHRCAHYQNQNGIWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLKEWLCWLRKEVGYDGWRLDFVRGFWGGYVKDYLDASEPYFAVGEYWDSLGYSYGEMDYNQDAHRQRIIDWIRATSGTASAFDVTTKGILHSALEKCEYWRLSDQEGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMQGYAYILTHPGTPSVFFDHILSHYKTEIEALVSIRKRNKIHCRSTVEISKAERDVYAAIIDEKIAMKIGPGHFEPSSTFHKWSLAIDGKDYKIWEASS 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00704 789 PANTHER ALPHA-AMYLASE 48 788 - -
Car02g00704 789 PRINTS Alpha-amylase signature 475 486 IPR006046 GO:0004556|GO:0005975|GO:0043169
Car02g00704 789 PRINTS Alpha-amylase signature 561 572 IPR006046 GO:0004556|GO:0005975|GO:0043169
Car02g00704 789 PRINTS Alpha-amylase signature 588 606 IPR006046 GO:0004556|GO:0005975|GO:0043169
Car02g00704 789 PRINTS Alpha-amylase signature 665 677 IPR006046 GO:0004556|GO:0005975|GO:0043169
Car02g00704 789 Pfam Alpha-amylase C-terminal beta-sheet domain 728 786 IPR012850 GO:0004556|GO:0005509|GO:0005975
Car02g00704 789 Gene3D Glycosidases 397 730 - -
Car02g00704 789 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 48 788 - -
Car02g00704 789 SUPERFAMILY Glycosyl hydrolase domain 731 786 - -
Car02g00704 789 SMART alpha-amyl_c2 727 787 IPR012850 GO:0004556|GO:0005509|GO:0005975
Car02g00704 789 Gene3D - 731 787 IPR013780 -
Car02g00704 789 Pfam Alpha amylase, catalytic domain 424 682 IPR006047 GO:0005975
Car02g00704 789 CDD AmyAc_arch_bac_plant_AmyA 398 737 - -
Car02g00704 789 SMART aamy 397 732 IPR006047 GO:0005975
Car02g00704 789 SUPERFAMILY (Trans)glycosidases 396 713 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00704 Car-Chr2 9358545 9364928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00704 1 788 Glycoside Hydrolase AT1G69830 62.484 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00704 K01176 - gmx:100810333 1229.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00704 02 9358545 9364928 Car02g00704 02 9358545 9364928 ECH
Car07g02078 07 25467890 25475934 Car02g00704 02 9358545 9364928 PCT