Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00593 ATGGCGGCAGAGAACAACAACGCAGCAGCCACAATTGATTCTCCCCTTAAGAGGCAAAGAGAAGAAGATGAACAACCAACAAATGGTGTCTCTCAAACTCTCTCTAAAGACCCTCTTCAACCCATTCATGGTTTATCATCTGTTATTCCTGGCTGGTTCTCTGAAATTAGCCCAATGTGGCCTGGGGAGGCTCACTCCTTGAAGGTGGAAAAGATTTTGTTTCAAGGAAAATCTGATTATCAGGATGTTATGGTCTTCCAGTCATCAACATATGGCAAGGTTCTTATTTTGGATGGAGTGATTCAGCTCACAGAAAGGGATGAGTGTGCCTACCAAGAGATGATCACTCATCTTCCTCTCTGCTCTATTCCAAACCCCAAAAAGGTTTTGGTTATTGGTGGAGGAGATGGGGGAGTCCTACGGGAAGTTTCACGCCATTCTTCAGTGGAAAAGATTGACATTTGCGAAATAGACAAGATGGTTGTTGATGTCTCCAAACAATTTTTCCCTGATATAGCAGTAGGTTTTGAGGATCCACGTGTGTCACTTCATATCGGCGATGGAGTTGCATTTTTGAAGGCAGCTACAGAAGGAACTTATGATGCAGTTATAGTGGATTCATCTGATCCTATTGGTCCTGCTCAAGAGCTTTTCGAAAAGCCCTTTTTTGCGTCAGTTGCAAGGGCTCTTCGTCCAGGAGGAGTTGTGTGTACTCAAGCGGAAAGTATATGGCTTCATATGCATATCATCGAGGACATTGTAGCGAATTGTCGCCAGATATTCAAAGGCTCTGTCAACTATGCTTGGACCACGGTTCCTACGTACCCAAGTGGGATGATTGGTTTTATGCTCTGCTCAACCGAAGGACCTTCCGTCGATTTCAAGCATCCAGTGAATCCTATAGATGAGAATGATGGCCAGCAGGCAACAAGACCATTGAAATTTTACAACTCAGAGCTTCATTCAGCCGCTTTCTGTTTGCCATCTTTTGCTAAGAGGGCGATTGCTTCTAAAGCTAATTGA 1023 0.4409 MAAENNNAAATIDSPLKRQREEDEQPTNGVSQTLSKDPLQPIHGLSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDIAVGFEDPRVSLHIGDGVAFLKAATEGTYDAVIVDSSDPIGPAQELFEKPFFASVARALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPSVDFKHPVNPIDENDGQQATRPLKFYNSELHSAAFCLPSFAKRAIASKAN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00593 340 PANTHER SPERMIDINE/SPERMINE SYNTHASE 9 340 IPR001045 GO:0003824
Car02g00593 340 Pfam Spermine/spermidine synthase domain 108 295 - -
Car02g00593 340 Pfam Spermidine synthase tetramerisation domain 51 105 IPR035246 -
Car02g00593 340 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 129 142 IPR030373 -
Car02g00593 340 TIGRFAM speE: spermidine synthase 52 330 IPR001045 GO:0003824
Car02g00593 340 PANTHER SPERMIDINE SYNTHASE-RELATED 9 340 - -
Car02g00593 340 Gene3D Spermidine synthase, tetramerisation domain 44 102 IPR037163 -
Car02g00593 340 MobiDBLite consensus disorder prediction 1 41 - -
Car02g00593 340 PIRSF Spermidine_synth 42 340 IPR030668 GO:0006595
Car02g00593 340 Hamap Polyamine aminopropyltransferase [speE]. 51 336 IPR001045 GO:0003824
Car02g00593 340 Gene3D Vaccinia Virus protein VP39 103 340 IPR029063 -
Car02g00593 340 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 50 287 IPR030374 -
Car02g00593 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 48 335 IPR029063 -
Car02g00593 340 MobiDBLite consensus disorder prediction 26 40 - -
Car02g00593 340 CDD AdoMet_MTases 128 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00593 Car-Chr2 7090635 7094754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00593 K00797 - gmx:100792107 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00593 02 7090635 7094754 Car02g00593 02 7090635 7094754 ECH
Car02g00593 02 7090635 7094754 Car07g01974 07 23045848 23050803 PCT