Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02824 ATGAGTCATGCACATTCTCATATTGGTTCTGGTAGTAGAACCACTCGAAGAGCTTTTGAGTTTGGCAAGACACATGTAGTGAGACCTAAGGGAAAACACCAAGCAACTATAGTTTGGCTGCATGGCCTTGGTGATAATGGTTTGAGTTCATCTCAGTTGCTGGAATCACTTCCACTTCCAAACATAAAATGGATTTGCCCTACTGCTCCGACCCGTCCTGTGGCAATACTTGGTGGTTTTCCCTGCACTGCATGGTTTGATGTGGGAGAACTTTCAGAAGATGGTCCAGATGACTGGGAAGGTTTAGATGCTTCAGCAGCACATATTGCTAATTTGTTGTCAACAGAGCCAGCTGATGTGAAAGTTGGTATTGGAGGGTTCAGCATGGGTGCAGCAATATCATTATACTCTGCAACTTGTTATGCCATGGGAAGGTATGGAAATGGCATTCCATACCCTATCAATTTAAGAGCAGTTGTTGGACTGAGTGGTTGGCTTCCAGGATCAAGGAGCTTAGGGAACAAAATAGAAGTGTCCCATGAAGCGAGAAGGCGAGCTGCGTCGATACCAATTTTACTGTGCCATGGAATCAGTGATGATGTAGTCCACTGCAAATATGGAGAGAAATCTGCTCAAACCTTAAGCTCAGCAGGGTTTCGACATATCGCATTCAAATCCTATGAAGGGCTTGGTCATTACACAGTTCCAAGAGAGATGGATGAAGTTTCAACCTGGCTTAATTCAAGGCTAGGGCTTGAAGGATTTTTGTCGTAA 774 0.4432 MSHAHSHIGSGSRTTRRAFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEDGPDDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAISLYSATCYAMGRYGNGIPYPINLRAVVGLSGWLPGSRSLGNKIEVSHEARRRAASIPILLCHGISDDVVHCKYGEKSAQTLSSAGFRHIAFKSYEGLGHYTVPREMDEVSTWLNSRLGLEGFLS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02824 257 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
Car01g02824 257 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Car01g02824 257 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Car01g02824 257 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Car01g02824 257 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02824 Car-Chr1 53501682 53505445 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02824 8 254 Acyl Lipid Metabolism Gene Families AT3G15650 79.352 1.05e-131 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02824 K06130 - gmx:100798395 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01548 01 32107076 32115665 Car01g02824 01 53501682 53505445 ECH
Car01g02824 01 53501682 53505445 Car01g02824 01 53501682 53505445 ECH