Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01548 ATGAGCTTCGCTGCACCATCCCTTGGTTCTATTGGTGGTAAATCTGCTGCCAGAGCATTTGAGTTTGGAAGAACCTATGTAGTCAGGCCTAAAGGTAAACACCAAGCAACTGTAGTTTGGTTGCATGGTCTCGGAGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAACATTAAATGGATATGTCCAACTGCTCCTACTCGACCAATGTCTTTATTTGGTGGCTTTCCTTCTACTGCTTGGTTTGATGTGGAAGAGCTATCTGAAGCAGCTCCTGATGATCTAGAAGGTTTGGATGCTTCAGCTGCACATGTTGCCAATTTGTTGTCCACAGAACCTGCAGACATTAAGCTATGTGTTGGAGGGTTTAGCATGGGAGCAGCTACTGCGCTTTACTCTGCATCCTGCTTTACTGCCGGAAAGTATGGGAATGGCAATGCTTATCCAGCCAACCTAAGTGCAGCTGTTGGTTTGAGTGGCTGGCTTCCATGTGCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGACGCCACGAGGCGTGCTCATTCCTTTCCCATTTTAATGTGTCATGGAAAAGGAGATGACGTGGTTCCATATAAGTTTGGTGAGAAATCATCCAAGTGCTTAAGTTCTAATGGATTTCAGGATGCAACTTTTAAAGCTTATAATGGGCTTGGCCACTACACAATTCCAGAAGAGATGGACGATGTTTGTGCTTGGCTAACATCAAAATTAGGCCTTGATGGCAATGTTGCCTAG 777 0.4517 MSFAAPSLGSIGGKSAARAFEFGRTYVVRPKGKHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMSLFGGFPSTAWFDVEELSEAAPDDLEGLDASAAHVANLLSTEPADIKLCVGGFSMGAATALYSASCFTAGKYGNGNAYPANLSAAVGLSGWLPCAKTLSNKLQGVDDATRRAHSFPILMCHGKGDDVVPYKFGEKSSKCLSSNGFQDATFKAYNGLGHYTIPEEMDDVCAWLTSKLGLDGNVA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01548 258 Gene3D alpha/beta hydrolase 16 252 IPR029058 -
Car01g01548 258 Pfam Phospholipase/Carboxylesterase 26 247 IPR003140 GO:0016787
Car01g01548 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Car01g01548 258 SUPERFAMILY alpha/beta-Hydrolases 26 251 IPR029058 -
Car01g01548 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01548 Car-Chr1 32107076 32115665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01548 1 255 Acyl Lipid Metabolism Gene Families AT5G20060 72.157 1.16e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01548 K06130 - gmx:100791683 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01548 01 32107076 32115665 Car01g02824 01 53501682 53505445 ECH
Car01g01548 01 32107076 32115665 Car01g01548 01 32107076 32115665 ECH