Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02815 ATGAAGAAACAATGTTCTGAAGAATCATCACAAACAAGTCCAAACCAAAAATTATCCTTAGAACATTGTTGGTTTGATGATGCATGCATCTTAGACATGGACTACTTTGTAAAAACTTTATCAGGAATCAAAGCAAAAGGCGTCCGAGCCGACTTAATCGGTTCAATCATCACACACTATGCATCAAAATGGCTCCCTGACTTATCAACTGAAAAGGGTCTAACACAATTTGAAGAATCATCACCTGAGAGTGTAACAGCTTCATGGATGAAAAAAAGGTTCTTTGTTGAAACCTTAGTTAATGTTCTACCACCAGAAAAAGATTCAATACCATGTAACTTTCTTCTTAGGCTTTTAAGAACAGCCAACATGGTTAATGTTGATTCAAATTACAAAACTGACCTTGAAAACAGAATTTCTTGGCAGTTAGATCAAGCTTCATTGAAAGAACTCATGATACCTTCTTTTAGTCATACTTGTGGGACCCTTTTGGATGTTGAACTTGTTATTAGGTTGGTTAAGAGGTTTGTATGTTTGGATCATGAAGGAGGTATAACTACTGCTGCTTTGGTTAAAGTTGCTAAGTTGGTTGATTCTTACCTTGCTGAGGTTGCTTTGGATGCTAATTTGAGTTTGTCTCAATTTGTTACACTTGCTGCTTCTCTTCCTTCTCATGCAAGACCTACTGATGATTGTTTGTATAGAGCCATTGACACTTATCTTAAAGCACATCCGAGTGTGTCGAAGCAAGAAAGGAAGGGTTTATGTAGATTGATTGATAGCAGAAAACTCACACCAGAAGCCTCACTTCATGCAGCTCAAAATGAAAGGTTACCTGTTAGAGCTGTTATTCAGGTTCTTTTCTCTGAACAAACGAAACTTAACCGTCACATCGATTGGAGTGCCTCTTTCGGTAGTTTGAGGAGTTCGAGTGTGAATGGTGTGTTTGACACGCCAGCACGATGCCTTTCGAAGCGTGAAATGAACACACAGCAAATGGAGATAAAGAAACTGAAGGAAGATGTTTATATGCTGCAAAGTCAGTGCAATGCATTGCAAGCACAGATGGAAAAGATGGCAGAAAAGAAAAAAAGGTTCTTCAAATGGAAGAAGCTTGGTTTTGGTAAAAGTGTTGGAGAGATTGAGAATGTTGAACAACAAGAAGTTGAATCCGAATTTGGATTTGGAAAGCAAACACCTATGGACATGAAAGCTAGTTTGTCCAAAGGTAGGACTCCACAAAAGTGGGGGAAATCACTGTCATGA 1266 0.3847 MKKQCSEESSQTSPNQKLSLEHCWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITHYASKWLPDLSTEKGLTQFEESSPESVTASWMKKRFFVETLVNVLPPEKDSIPCNFLLRLLRTANMVNVDSNYKTDLENRISWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFVCLDHEGGITTAALVKVAKLVDSYLAEVALDANLSLSQFVTLAASLPSHARPTDDCLYRAIDTYLKAHPSVSKQERKGLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHIDWSASFGSLRSSSVNGVFDTPARCLSKREMNTQQMEIKKLKEDVYMLQSQCNALQAQMEKMAEKKKRFFKWKKLGFGKSVGEIENVEQQEVESEFGFGKQTPMDMKASLSKGRTPQKWGKSLS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02815 421 PANTHER OS12G0117600 PROTEIN 13 420 IPR043454 -
Car01g02815 421 MobiDBLite consensus disorder prediction 400 421 - -
Car01g02815 421 Coils Coil 335 355 - -
Car01g02815 421 Pfam NPH3 family 23 269 IPR027356 -
Car01g02815 421 ProSiteProfiles NPH3 domain profile. 22 293 IPR027356 -
Car01g02815 421 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 13 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02815 Car-Chr1 53421062 53423563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02815 24 294 EF-hand Containing Proteins AT3G44820 36.877 1.04e-52 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02815 - - gmx:100777820 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02815 01 53421062 53423563 Car01g02815 01 53421062 53423563 ECH
Car01g02815 01 53421062 53423563 Car06g02377 06 25871274 25873381 PCT