Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02494 ATGCGAATTCTCATTCTTCTCTCCCTCACAGCACTTCTCTTCTTTTCATCCTTCTCTCCCATTCTCTGCCAAGTAGAACTCGATGAAGATCTCAGCTTCCTCGATGAACCAGACACCGACACCTCACACCACCACCCCGACTCCGGCGAGTTCCTCAACGACGCCGATCTCGACGAATTTCCCGATCACGACGACGCAGAATCTTACAAACCTCCCGAGGTTGACGAAAAAGACGTCGTCGTTTTAAAGGATAACAATTTCACCGACGTGGTCAACAAAAACCGGTACGTCATGGTCGAATTCTACGCGCCGTGGTGTGGTCATTGCCAAGCTTTAGCACCCGAGTATGCTTCCGCTGCTACCGAATTGAAGGGTGAGAATGTAATTTTAGCGAAAGTTGATGCCACGGAGGAGAGTGACGTGGCTCAGAAATATGGTGTTGAGGGTTTTCCTACTATCTATTTCTTCATTGATGGAATTCATAAAGCTTATACTGGCCATAGAACAAAAGAAGCTATAGTGACGTGGATTAAGAAGAAGACTGGACCTGGTATACACAACATTACTACATTGGAGGATGCTCAACGTATATTGAGTTCCGAAACTAAAGTTGTTTTGGGCTTCCTCAATTCTTTAGTTGGTCCTGAGAGTGAGGAGTTTGCTGCGGCTTCACGACTTGAGGATGATGTCAATTTTTATCAGACTGTGGATCCTGAGGTGGCAAAGCTTTTCCATATTGACATTAATGTCAAACGACCTGCTTTGATCCTTTCTGCAATAGTAGACTTTGTCTCTTCCAACAAGATCCCTTTGGTAACAGTTTTTACTAGAGAAAATGCTCCATCAATCTTTGAAAATCCAATCAAAAAACAGTTGTTGCTGTTTGCGACTTCAAATGACTCAGAGAAATTCCTCCCAGTATTTCAGGAAGCAGCAAAATCTTTCAAGGGAAAGTTGATCTTTGTGTTTGTGGAAACTGATAACGAAGATATTGGGAAGCCTGTTTCAGAATACTTTGGTGTTAGTGGGAGTGATACAAAAGTACTTGCATACACTGGAAATGATGATGGGAGAAAATTTGTGCTTGAGGGAGAGGTGACTGTTGACAAAATTAAGGCATTTGGGGAAGATTTCCTTGAAGACAAACTAAAACCTTTTTTCAAGTCAGAGCCGGTTCCTGAAAATAACGATGGTGACGTGAAAATAGTTGTTGGGAATAATTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTTGAGATATATGCTCCCTGGTGTGGCCATTGCCAACATTTGGAACCAATATACAACAAGCTTGCAAAACATCTTCGTAGTATTGACTCTCTAGTAATAGCAAAGATGGATGGAACACAAAATGAGCATCCCAGGGCAAAGGCTGATGGATTCCCCACTCTTCTCTTCTTCCCAGCTGGAAACAAAAGTTTTGATCCTATTACTGTTGAAACAGATCGTTCAGTGGTAGCCTTTTATAAGTTCCTCAAGCAACATGCATCAATCCCATTCAAGCTCCAGAAACCAACCTCAACTCCTAAATCAGAGGGATCTGATGCCAAGGAGAGTTCTGATGTCAAAGAGAACCAAAGTAGCAATAGCGAAGTGAGGGATGAACTATGA 1641 0.4247 MRILILLSLTALLFFSSFSPILCQVELDEDLSFLDEPDTDTSHHHPDSGEFLNDADLDEFPDHDDAESYKPPEVDEKDVVVLKDNNFTDVVNKNRYVMVEFYAPWCGHCQALAPEYASAATELKGENVILAKVDATEESDVAQKYGVEGFPTIYFFIDGIHKAYTGHRTKEAIVTWIKKKTGPGIHNITTLEDAQRILSSETKVVLGFLNSLVGPESEEFAAASRLEDDVNFYQTVDPEVAKLFHIDINVKRPALILSAIVDFVSSNKIPLVTVFTRENAPSIFENPIKKQLLLFATSNDSEKFLPVFQEAAKSFKGKLIFVFVETDNEDIGKPVSEYFGVSGSDTKVLAYTGNDDGRKFVLEGEVTVDKIKAFGEDFLEDKLKPFFKSEPVPENNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQHLEPIYNKLAKHLRSIDSLVIAKMDGTQNEHPRAKADGFPTLLFFPAGNKSFDPITVETDRSVVAFYKFLKQHASIPFKLQKPTSTPKSEGSDAKESSDVKENQSSNSEVRDEL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02494 546 CDD PDI_b_family 185 257 - -
Car01g02494 546 PANTHER PROTEIN DISULFIDE-ISOMERASE 48 536 - -
Car01g02494 546 PRINTS Thioredoxin family signature 146 157 - -
Car01g02494 546 PRINTS Thioredoxin family signature 97 105 - -
Car01g02494 546 PRINTS Thioredoxin family signature 105 114 - -
Car01g02494 546 Gene3D Glutaredoxin 73 182 - -
Car01g02494 546 CDD PDI_a_family 80 177 - -
Car01g02494 546 ProSiteProfiles Thioredoxin domain profile. 60 182 IPR013766 -
Car01g02494 546 ProSitePatterns Thioredoxin family active site. 98 116 IPR017937 -
Car01g02494 546 SUPERFAMILY Thioredoxin-like 187 279 IPR036249 -
Car01g02494 546 MobiDBLite consensus disorder prediction 512 546 - -
Car01g02494 546 Gene3D Glutaredoxin 183 260 - -
Car01g02494 546 MobiDBLite consensus disorder prediction 524 546 - -
Car01g02494 546 PANTHER PROTEIN DISULFIDE ISOMERASE 48 536 - -
Car01g02494 546 Pfam Thioredoxin 79 179 IPR013766 -
Car01g02494 546 Pfam Thioredoxin 400 487 IPR013766 -
Car01g02494 546 Gene3D Glutaredoxin 261 394 - -
Car01g02494 546 TIGRFAM pdi_dom: protein disulfide-isomerase domain 82 180 IPR005788 GO:0003756
Car01g02494 546 Pfam Thioredoxin-like domain 217 374 - -
Car01g02494 546 SUPERFAMILY Thioredoxin-like 267 397 IPR036249 -
Car01g02494 546 CDD PDI_b'_family 279 379 - -
Car01g02494 546 Gene3D Glutaredoxin 395 508 - -
Car01g02494 546 SUPERFAMILY Thioredoxin-like 395 507 IPR036249 -
Car01g02494 546 TIGRFAM ER_PDI_fam: protein disulfide isomerase 77 545 IPR005792 GO:0003756
Car01g02494 546 ProSiteProfiles Thioredoxin domain profile. 378 507 IPR013766 -
Car01g02494 546 SUPERFAMILY Thioredoxin-like 71 182 IPR036249 -
Car01g02494 546 MobiDBLite consensus disorder prediction 38 52 - -
Car01g02494 546 CDD PDI_a_PDI_a'_C 400 502 - -
Car01g02494 546 ProSitePatterns Thioredoxin family active site. 420 438 IPR017937 -
Car01g02494 546 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02494 Car-Chr1 50649708 50653515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02494 K09580 - gmx:100804924 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02494 01 50649708 50653515 Car01g02494 01 50649708 50653515 ECH
Car06g03488 06 65748316 65753633 Car01g02494 01 50649708 50653515 ECH
Car01g02494 01 50649708 50653515 Car06g03488 06 65748316 65753633 PCT