Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01124 ATGGCTGTTTCCATGAGAGATTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTTGAAATATGGCGTATTGAGAACTTTAATCCAATACCTGTCCCAAAGTCCTCTTATGGCAAATTTTTCACAGGGGATTCCTATGTGATTTTAAAGACAACCACATCAAAAAGTGGTGCTCTGCGTCATGACATCCATTACTGGATTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGGGAAGTACAGGGCCATGAAACCGAAAAGTTCCTGTCTTATTTCAAACCTTGTATTATACCTCAAGAAGGTGGAGTTGCTTCTGGTTTTAAACATGCGGAGGCTGAAAACCATAAGACACGGTTGTTTGTATGCAGAGGGAAACATGTTGTACATGTCAAAGAGGTTCCTTTTGCTCGATCTTCACTCAACCATGATGATATATTTGTTCTTGACACTGAGTCAAAAGTCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGAGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCATGAGGGGAAATGTGAGGTAGCCGCTATTGAGGATGGAAAGTTAATGGCTGATCCTGAAACTGGTGAATTCTGGGGTTTCTTTGGTGGATTTGCTCCTCTTCCACGAAAAGCAGCCACTGACGATGATAAGTCTGCTGATTCTCGCCCTCCAAAACTGCTTTGTGTTGAGAAAGGACAGGCTGATCCTGTTGAGACTGATTCTTTAAAAAGGGAGTTTCTATACACAAATAAATGTTATATTCTGGATTGTGGGTTGGAAATGTTTGTTTGGATGGGAAGAAATACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGTTGCTGATGAGTTAGTCAGTGGCATCGATAAACTTAAACCCCAAATAATTCGTGTGATTGAAGGATTTGAAACAGTGTTGTTTAAGTCCAAGTTTGATTCTTGGCCTCAGACCCCTGATGTAACTGTTTCTGAAGATGGACGTGGCAAGGTAGCAGCACTTTTGAAACGTCAAGGAGTGAATGTCAAGGGTCTGTTGAAAGCTGATGCAGTAAAAGAAGAACCTCAACCGTACATTGATTGCACAGGACATTTGCAGGTTTGGCGTGTGAACGGCCAAGAAAAGATTCTTCTCCCAGCTTCTGATCAGTCAAAATTTTATAGTGGAGATTGCTTCATCTTTCAGTATTCATATCCTGGAGAAGATAAGGATGATTGTCTCATTGGAACGTGGATAGGAAAGAATAGTGTTGAGGAAGAAAGAGCTTCAGCTAATTCACTGGCTAGCAAAATCGTTGAGTCAATGAAGTTTCTGGCTTCCCTGGCTCGTATTTATGAAGGCAATGAACCAATTCAATTTCATTCTATTCTACAAACCATCATTGTTTTTAAGGGCGGTCTTAGTGATGGATACAAGACTAACATTGCGGAAAAGGAAATTCCAGATGAGACATACAATGAGGATGGTGTTGCATTATTTCGCATCCAGGGCTCTGGACCAGAGAATATGCAAGCTATACAAGTTGAACCGGTTGCGTCTTCCTTGAATTCCTCTTATTGTTACATACTTCACAATGGGCCTGCTGTCTTTACTTGGTCTGGAAGCAATACAAGTGCAGAAGACCAGGAACTTGTAGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAAACCAAACCACAAAGGGAAGGGACAGAATCTGAACAATTTTGGGATTTATTGGGAGGAAAGTCGGAATATCCCAGTCAAAAGATTACTAGGGAGGCTGAAAGTGATCCTCACCTATTTTGTTGCAACTTCTCAAAAGGAAATTTGAAGGTGACAGAGATATACAACTTCTCCCAGGATGATTTAATGACAGAAGACATTTTCATCTTGGATTGTTACTCAGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGACCCCAAGAGTAGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTCTTCTGGAAAAATTATCTCGCGTGGCTCCAATATATGTTGTCATGGAAGGGAGTGAGCCACCGTTTTTCACTCGCTTTTTTAATTGGGAGTCGGCGAAATCTGCAATGTTGGGCGACTCATTTCAAAGGAAGCTTAAAATCGTGAAAAATGGGGGTACTGCACCATTGGATAAACCCAAACGGCGAACACCGACATATGGAGGAAGGTCTAGTAGTGTGCCTGATAAATCCCAGCGTTCTTCCCGTAGCATGTCTGTTAGTCCTGATCGTGTTCGTGTGAGGGGTAGGTCCCCAGCCTTTAATGCACTAGCAGCTACTTTTGAGAGCGCCAATGCAAGGAATCTTTCAACTCCACCTCCAGTAATTAGAAAGCTGTATCCTAAATCTACGACACCAGATTCTGCAATACTAGCATCAAAATCTAAATCCATAGCTGCACTTGGTTCTGCTTTTGAACGACCACCTTCTGCAAGAGAAAGTATTATGCCTCGGTCAGTTAAAGGTATAGAATTGATGAAATAA 2589 0.4187 MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPIPVPKSSYGKFFTGDSYVILKTTTSKSGALRHDIHYWIGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAENHKTRLFVCRGKHVVHVKEVPFARSSLNHDDIFVLDTESKVFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEVAAIEDGKLMADPETGEFWGFFGGFAPLPRKAATDDDKSADSRPPKLLCVEKGQADPVETDSLKREFLYTNKCYILDCGLEMFVWMGRNTSLDERKSASGVADELVSGIDKLKPQIIRVIEGFETVLFKSKFDSWPQTPDVTVSEDGRGKVAALLKRQGVNVKGLLKADAVKEEPQPYIDCTGHLQVWRVNGQEKILLPASDQSKFYSGDCFIFQYSYPGEDKDDCLIGTWIGKNSVEEERASANSLASKIVESMKFLASLARIYEGNEPIQFHSILQTIIVFKGGLSDGYKTNIAEKEIPDETYNEDGVALFRIQGSGPENMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGSNTSAEDQELVERMLDLIKPNLQTKPQREGTESEQFWDLLGGKSEYPSQKITREAESDPHLFCCNFSKGNLKVTEIYNFSQDDLMTEDIFILDCYSEIFVWVGQQVDPKSRMQALTIGEKFLEHDFLLEKLSRVAPIYVVMEGSEPPFFTRFFNWESAKSAMLGDSFQRKLKIVKNGGTAPLDKPKRRTPTYGGRSSSVPDKSQRSSRSMSVSPDRVRVRGRSPAFNALAATFESANARNLSTPPPVIRKLYPKSTTPDSAILASKSKSIAALGSAFERPPSARESIMPRSVKGIELMK 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01124 862 MobiDBLite consensus disorder prediction 754 776 - -
Car01g01124 862 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 253 427 IPR036180 -
Car01g01124 862 Gene3D Severin 613 734 IPR029006 -
Car01g01124 862 SMART VILL_6 519 606 IPR007122 GO:0051015
Car01g01124 862 SMART VILL_6 137 234 IPR007122 GO:0051015
Car01g01124 862 SMART VILL_6 19 117 IPR007122 GO:0051015
Car01g01124 862 SMART VILL_6 254 344 IPR007122 GO:0051015
Car01g01124 862 SMART VILL_6 622 719 IPR007122 GO:0051015
Car01g01124 862 SMART VILL_6 392 489 IPR007122 GO:0051015
Car01g01124 862 CDD gelsolin_S5_like 517 608 - -
Car01g01124 862 CDD gelsolin_S2_like 138 223 - -
Car01g01124 862 Gene3D Severin 133 247 IPR029006 -
Car01g01124 862 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Car01g01124 862 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Car01g01124 862 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Car01g01124 862 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Car01g01124 862 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Car01g01124 862 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Car01g01124 862 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Car01g01124 862 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Car01g01124 862 CDD gelsolin_S6_like 621 718 - -
Car01g01124 862 Pfam Gelsolin repeat 150 216 IPR007123 -
Car01g01124 862 Pfam Gelsolin repeat 266 334 IPR007123 -
Car01g01124 862 Pfam Gelsolin repeat 410 479 IPR007123 -
Car01g01124 862 Pfam Gelsolin repeat 30 111 IPR007123 -
Car01g01124 862 Pfam Gelsolin repeat 638 712 IPR007123 -
Car01g01124 862 Gene3D Severin 7 132 IPR029006 -
Car01g01124 862 SUPERFAMILY Actin depolymerizing proteins 137 240 - -
Car01g01124 862 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Car01g01124 862 Gene3D Severin 248 355 IPR029006 -
Car01g01124 862 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Car01g01124 862 Gene3D Severin 517 612 IPR029006 -
Car01g01124 862 CDD gelsolin_S3_like 254 343 - -
Car01g01124 862 MobiDBLite consensus disorder prediction 740 781 - -
Car01g01124 862 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Car01g01124 862 CDD gelsolin_S4_like 386 485 - -
Car01g01124 862 Gene3D Severin 388 502 IPR029006 -
Car01g01124 862 PANTHER VILLIN-4 1 850 - -
Car01g01124 862 SUPERFAMILY Actin depolymerizing proteins 511 614 - -
Car01g01124 862 CDD gelsolin_S1_like 12 124 - -
Car01g01124 862 PANTHER VILLIN 1 850 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01124 Car-Chr1 11392585 11404978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01124 - - adu:107483828 1542.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01124 01 11392585 11404978 Car07g00278 07 2528036 2538099 PCT