Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00204 ATGGTTTATCAGTATATTCTAGCAGGGATTATAGCTTATTATAGTTTGGTGTTTGTGTTTGTTTTGTACAGTTCTGCATCAAAGAAAAAGGCTAAAGTTTCAGAAATCAATAATGGTTGTTTTAATAATAATAATATTAGTGAATCAGAAATAGGAAAAAATATATGCCCTCAAGAAACCTCAGAAAATATAGACATCATAATTGTGGGAGCCGGTGTTGCTGGTGCAGCCCTTGCTTACACACTTGGGAAGGATGGAAGACAAGTGCATGTTATTGAGAGAGATCTGAGTGAACCTGACAGGATTGTAGGTGAATTGCTACAACCAGGAGGTTATTTGAaattaattgaattagatcttgaagATTGTGTGGACGAAATAGATGCTCAAAAAGTGTTTGGCTATGCTCTTTACAAAGATGGAAAAAATACCAAACTTTCTTATCCCTTGAAAAAATTTAATGTTGATGTTTCTGGAAGAAGCTTTCACAATGGACGTTTCATACAGAGAATGAGAGACAAGGCTTCATCTCTTCAAAATGTGAAATTAGAACAAGGAACTGTTACCTCTCTAATTGAAGAAAATGGAATCATCAAAGGAGTATACTACAAAACCAAGAATGGACAAGAGCTCACAACAAAGGCTCCTCTTACCATAGTTTGTGATGGTTGTTTTTCCAACTTAAGACGTTCTCTTTGCAACTCAAAGGTAGTTGAAGTACCATCTCATTTTGTTGGTTTGGTACTAGAGAATTGCAATCTTCCATATGCAAATCATGGACATGTTATCTTAGGTGATCCTTCTCTAATTTTATTTTATCCGATTAGTAGCACTGAGATTCGATGTTTAGTTGATGTGTCTGGCCAAAAATTACCCTCCCTTGGAAATGGTGACATGACACATTATCTCAAAACAGTTGTAGTTCCTCAGGTTCCAGAGGAGCTTCAATGTTCTTTTGTAGAAGCAATTGATAAAGGAAACATAAGAAGTATGCCAAATAGAAGCATGGCAGCATGTCCTTATCCCAAACCAGGGGCACTTCTAATGGGAGATGCTTTCAATATGAGACACCCTTTAACTGGAGGTGGAATGACTGTGGCTTTATCTGATATTGTTTTACTAAGAGATCTTCTTAGACCTCTACATCACTTACATCATGCTTCTGCTCTTTGTAAATATCTTGAATCATTTTACACACTGCGCAAGCCAGTAGCATCTACAATAAACACATTAGCTGGGGCATTGTACAAGGTATTTTGTGCATCTTCTGATCCAGATAATAAGGAAATGAGACAAGCATGTTTTGATTATTTGAGTCTTGGAGGAGTTTTCTCAGATGGACCAATGGCTTTACTCTCAGGTCTTAATCCTCGTCCATTAATCTTGCTTCTACATTTTTTCGCCGTCGCTATATATGGTGTTGGTCGCTTACTCGTGCCATTTCCTTCTCCCAAACGCATGTTGATTGGAGCTAGATTGATTTCGGGTGCATCAGGTAAAAAAGAGGAAAAATCAACGAGCGTCGAAGACGACAATAGAGATCCTTCCACCGCAAACAGAGACGAGATGGATCTGGAGACTGAAAATAGATTAGCTGCTATGCTTATGAAGGAAGCAGCTGAGTTGCGGCGGCAGTCTGAAAAGGAAGGTGTTCTAGCTTATCTTCAAAAGCCTAATGTACGGAATCGCCCAAATTCACGTTTCCTCACTGCTACCGTACTTGGGGTACAACAAGCAAATCGAACTGTGGAAGTAAATGAAATGTGGCGAGCGCGGGAGAAAGAAATGGAGCTAGATAAAAGGGTTGCAGGCACATCAATAGATAAAAGCAGTGGTGACAAAAGGCATAGGGATCATAGCTCATCAAGAAGCACTAGTGCCTCTGCTTCATGCTCAACTAAAAAAGAATATGAGCATACTCCAGAAGGTTTAAATGACGAAGAGCTTGAGGAGTTTCTACACTCAAGGATGAAGCGAGGCAGAGGTGCTATTGGTCCAAGGATGGACGAGACAGGGCCTTACCTTCCTCCTAATCCTGATGAAGAGCCTTGTACCAGTCTGGATTTAAGGGAACGTCGTGCTATTTATGGTCCGCAGAGGCCTCCATCGTTGCAATCAGACGAGTCTGAGGAGGAGCTTCATGAAGAAAAGCGGAAAAAGAGTAAAAAGTCGCATAAAAGCCACTCGGACAAGGGACATTCTAAGAAGCACAGATCCAAAGATAAATCTAAACATAAGAAAAAGAAAAGGGAGGAGAAAAGAAAAGCTCGAGGTCACTGGCTACCTGGAAGGCCCAACGAAACCCCAAAGCTTCGGCCTGTGCAGGCTGGTCTGCACCCTAGAGTTGATGTCTACATTGGGGGGCGTGAAGTTCAAGAGGCTATGACCAAGTGTGCTTGA 2400 0.405 MVYQYILAGIIAYYSLVFVFVLYSSASKKKAKVSEINNGCFNNNNISESEIGKNICPQETSENIDIIIVGAGVAGAALAYTLGKDGRQVHVIERDLSEPDRIVGELLQPGGYLKLIELDLEDCVDEIDAQKVFGYALYKDGKNTKLSYPLKKFNVDVSGRSFHNGRFIQRMRDKASSLQNVKLEQGTVTSLIEENGIIKGVYYKTKNGQELTTKAPLTIVCDGCFSNLRRSLCNSKVVEVPSHFVGLVLENCNLPYANHGHVILGDPSLILFYPISSTEIRCLVDVSGQKLPSLGNGDMTHYLKTVVVPQVPEELQCSFVEAIDKGNIRSMPNRSMAACPYPKPGALLMGDAFNMRHPLTGGGMTVALSDIVLLRDLLRPLHHLHHASALCKYLESFYTLRKPVASTINTLAGALYKVFCASSDPDNKEMRQACFDYLSLGGVFSDGPMALLSGLNPRPLILLLHFFAVAIYGVGRLLVPFPSPKRMLIGARLISGASGKKEEKSTSVEDDNRDPSTANRDEMDLETENRLAAMLMKEAAELRRQSEKEGVLAYLQKPNVRNRPNSRFLTATVLGVQQANRTVEVNEMWRAREKEMELDKRVAGTSIDKSSGDKRHRDHSSSRSTSASASCSTKKEYEHTPEGLNDEELEEFLHSRMKRGRGAIGPRMDETGPYLPPNPDEEPCTSLDLRERRAIYGPQRPPSLQSDESEEELHEEKRKKSKKSHKSHSDKGHSKKHRSKDKSKHKKKKREEKRKARGHWLPGRPNETPKLRPVQAGLHPRVDVYIGGREVQEAMTKCA 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00204 799 Gene3D - 57 447 IPR036188 -
Car01g00204 799 MobiDBLite consensus disorder prediction 595 685 - -
Car01g00204 799 Pfam Squalene epoxidase 214 485 IPR013698 GO:0004506|GO:0016021|GO:0050660
Car01g00204 799 MobiDBLite consensus disorder prediction 697 775 - -
Car01g00204 799 Coils Coil 525 545 - -
Car01g00204 799 MobiDBLite consensus disorder prediction 635 665 - -
Car01g00204 799 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 65 87 - -
Car01g00204 799 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 214 229 - -
Car01g00204 799 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 343 358 - -
Car01g00204 799 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 358 374 - -
Car01g00204 799 PANTHER SQUALENE MONOOXYGENASE 1 499 IPR040125 GO:0004506|GO:0016126
Car01g00204 799 MobiDBLite consensus disorder prediction 595 622 - -
Car01g00204 799 Pfam NAD(P)-binding Rossmann-like domain 68 94 - -
Car01g00204 799 MobiDBLite consensus disorder prediction 719 755 - -
Car01g00204 799 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 499 - -
Car01g00204 799 SUPERFAMILY FAD/NAD(P)-binding domain 64 440 IPR036188 -
Car01g00204 799 MobiDBLite consensus disorder prediction 500 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00204 Car-Chr1 1567875 1576825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00204 65 499 Miscellaneous Gene Families AT1G58440 76.552 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00204 K00511 - gmx:100796946 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00204 01 1567875 1576825 Car01g00204 01 1567875 1576825 ECH
Car06g01456 06 14063909 14068364 Car01g00204 01 1567875 1576825 PCT