Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00287 ATGGCCGAAGCCATGATAGCTCAAAAAGCTCTTGAGGATTTTGATCCTCAAAAGAAGCCAAAGAGGAACAAGTTTGCTTTTGCCTGTGCTATATTGGCCTCCATGACTTCCATCTTACTTGGTTACGATATTGGTGTGATGAGCGGAGCTGCCatgttcataaaaaaagatCTCAAAGTATCGGACGTGCAAATCGAAATACTGTCGGGGATCATAAATCTATACTCTCTCATAGGTTCTTGCCTTGCTGGTAGAACCTCTGACTGGATTGGTCGCCGTTACACTATCGTTTTCGCTGGTAGCATATTCTTCACCGGAGCTGTCCTCATGGGCTTCTCCACCAACTATGCGTTCCTTATGTTCGCCCGCTTCATCGCCGGCATTGGTATCGGTTATGCCCTCATGATTGCTCCCGTCTATACCGCCGAAGTCTCCCCTGCTTCCTCTCGTGGCTTTCTCACCTCCTTCCCTGAGGTTTTCATCAATGGTGGGGTTTTACTGGGGTACATTTCGAATTATGCATTTTCTAAGCTCCCACTCTACTTGACTTGGCGGCTCATGCTCGGAATCGGCGCTATTCCTTCCGTCCTCCTAGCCGTTGGGGTTTTAGCCATGCCGGAGTCACCTCGCTGGCTTGTCATGCGGGGTCGGCTTGGTGAAGCCAGAAAAGTCCTTGACAAGACCTCTGACTCCAAGGAAGAGGCTCAGCTAAGGCTAGCCGACATCAAAGAAGCCGCTGGGATTCCTGAGAGCTGCAATGACGACATCGTTCAGgtaaccaagaaaaagagtgGCGGCGAGGGTGTATGGAAAGAGATGTTCATTAATCCAACACCAGCCGTTCGTCACATCTTGATTGCGGGTCTTGGGATTCACTTCTTTCAACAAGCATGTGGCATAGACGCCGTCGTTCTGTACAGCCCCAGGATCTTCCAGCAGGCTGGGATCACCTCAGACACTGAAAGGCTTCTTGCTACCGTAGCCGTTGGATTCACTAAGACCATCTTCATCTTGGTGGCCACATTCATGCTGGATCGGGTTGGGCGTCGCCCGTTGCTCTTGAGTAGTTTTGGTGGTATGATAATTTCTCTTATAACGCTCGCCGCGAGCCTCACGATCATTGAAAATTCACACACGAAGCTAATATGGGCCATTGGATTGAGCATTGCCACCGTATTATCCTTTGTGGCCACTTTTTCAATCGGGGCGGGTCCTATCGCGTGGGTCTATAGCTCGGAGATTTTCCCGTTGAAGCTACGGGCCCAGGGTTGTGCAATGGGAGTTGCGGTGAATAGAGTTACAAGTGGGGTCATCTCAATGACTTTTCTGTCCCTCACTAATGCGATCTCTACTGGTGGggccttctttctctttgccGGGATTGCATCAGTGGGTTGGCTCTTCTTCTTTACCATGCTCCCCGAAACACAGGGTAAAACCCTCGAGGAGATGGAAGGGTCTTTTGGTAAATTCTGGAGGGACTCTGATTCCGGGGTGGCTAAGGGTAACGACAACAACGGTCAAATCCAACTAGAAACCAACCGCCGGACTTA 1553 0.4868 MAEAMIAQKALEDFDPQKKPKRNKFAFACAILASMTSILLGYDIGVMSGAAMFIKKDLKVSDVQIEILSGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGSIFFTGAVLMGFSTNYAFLMFARFIAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGVLLGYISNYAFSKLPLYLTWRLMLGIGAIPSVLLAVGVLAMPESPRWLVMRGRLGEARKVLDKTSDSKEEAQLRLADIKEAAGIPESCNDDIVQVTKKKSGGEGVWKEMFINPTPAVRHILIAGLGIHFFQQACGIDAVVLYSPRIFQQAGITSDTERLLATVAVGFTKTIFILVATFMLDRVGRRPLLLSSFGGMIISLITLAASLTIIENSHTKLIWAIGLSIATVLSFVATFSIGAGPIAWVYSSEIFPLKLRAQGCAMGVAVNRVTSGVISMTFLSLTNAISTGGAFFLFAGIASVGWLFFFTMLPETQGKTLEEMEGSFGKFWRDSDSGVAKGNDNNGQIQLETNRRT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00287 517 TIGRFAM SP: MFS transporter, sugar porter (SP) family 17 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva14g00287 517 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva14g00287 517 PRINTS Sugar transporter signature 120 139 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva14g00287 517 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva14g00287 517 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva14g00287 517 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva14g00287 517 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 13 507 IPR045262 GO:0015144
Bva14g00287 517 ProSitePatterns Sugar transport proteins signature 2. 125 150 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bva14g00287 517 Pfam Sugar (and other) transporter 29 486 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva14g00287 517 CDD MFS_PLT 32 484 IPR044776 GO:0005351
Bva14g00287 517 PANTHER SUGAR TRANSPORTER 13 507 - -
Bva14g00287 517 SUPERFAMILY MFS general substrate transporter 15 485 IPR036259 -
Bva14g00287 517 ProSitePatterns Sugar transport proteins signature 1. 83 100 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bva14g00287 517 Coils Coil 225 245 - -
Bva14g00287 517 Gene3D MFS general substrate transporter like domains 19 490 IPR036259 -
Bva14g00287 517 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 477 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00287 Bva-Chr14 1479261 1482546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00287 12 516 Organic Solute Cotransporters AT3G18830 70.000 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00287 - - gmx:547958 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00287 14 1479261 1482546 Bva14g00287 14 1479261 1482546 ECH
Bva13g00218 13 1052994 1064109 Bva14g00287 14 1479261 1482546 ECH