Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00218 atggcgGCTGAAGCTACCATGGATCAAAAGGCCCTTCCTGATTTTGATCCTCCAAAGAAGCCTAAGAGGAACAAGTTTGCTTTTGCCTGTGCTATTCTCGCCTCCATGACTTCCATCTTACTTGGttatgATATTGGTGTGATGAGTGGAGCTGCCATATTCATACAAAGGGACCTTAAAGTATCAGACGTGAAAATCGAGATACTAATGGGTATCATAAATGTCTACTCTCTCATAGGTTCTTGCCTCGCTGGTAGAACCTCTGACTGGCTTGGTCGCCGTTACACTATTGTTTTCGCCGGTGCCATATTCTTCGCCGGAGCTATCCTTATGGGTTTCTCCACCAACTATACATTCCTCATGTGCGGCCGCTTCGTCGCCGGTGTTGGCATCGGTTACGCCCTCATGATTGCTCCCGTCTACACCGCCGAAGTCTCCCCTGCTGCTTCTCGTGGCTTTCTCACCTCCTTCCCCGAGGTTTTCATCAACGGGGGAATTTTACTGGGGTACATTTCGAATTATGCATTTTCTAAGGTCCCGCTTTACTTGACTTGGCGGCTCATGCTCGGAATCGGCGCGGTGCCTTCTGTTGTCCTAGCCCTAGTGGTCTTAGTCATGCCGGAGTCACCTCGCTGGCTTGTCATGCAGGGTCGTCTTGGTGAAGCCAGAAAAGTCCTTGATAAGACCTCAGACTCCAAGGAGGAGGCTCTGTTAAGGCTAGCCGACATCAAAGAAGCCGCTGGGATTCCTGAGAGCTGCAACGACGACGTCGTTCAAGTAAGCAAGCAAAAACGTGGTGGTGAAGGTGTATGGAGAGAGATGTTCGTCAATCCAACGCCAGCCGTTCGTCACATCCTGATCGCGGGTCTCGGGATTCACTTCTTCCAACAAGCATCTGGTATAGACGCCGTCGTTTTGTACAGCCCCACAATCTTTAAGAAGGCCGGAATCACCTCGGACACAGATCAGCTTCTTGCAACCGTAGCCGTTGGATTCGTTAAAACCCTCTTCATCTTGGTGGCCACATTCACGTTGGATCGATTCGGGCGTCGACCGTTGCTATTGAGTAGTTTTGGTGGtatgatattttctctaaCAACCCTCGCCGTGAGCCTCACGATCATTGATCACTCACACACGAAGCTAATGTGGGCCGTTGGATTGAGCATTGCCACCGTATTATCCTACGTGGCCACGTTTTCAATCGGGGCGGGTCCCATCACATGGGTCTATAGCTCCGAGATTTTCCCGTTGAAGCTACGTGCCCAAGGTTGTGCTATGGGGGTTGTGGTGAATAGAGTTACAAGTGGGGTCATCTCAATGACTTTTCTGTCCCTCTCAAAAGCGATAACTATTGGTGGGGCCTTCTTCCTCTTCGGTGGAATTGCATTAGTGGGTTGGCTCTTCTTCTTTACCATGCTCCCTGAAACACAGGGTAAAACCCTCGAGGAAATGGAAGGATCTTTTGGTAAATTCTGGCGGAAGTCTGATGCCAAGGGAACTAACGGTAACGACAACAACGGCCAAATCCAGTTAGAAACCAACGGCCGGACTTA 1556 0.4942 MAAEATMDQKALPDFDPPKKPKRNKFAFACAILASMTSILLGYDIGVMSGAAIFIQRDLKVSDVKIEILMGIINVYSLIGSCLAGRTSDWLGRRYTIVFAGAIFFAGAILMGFSTNYTFLMCGRFVAGVGIGYALMIAPVYTAEVSPAASRGFLTSFPEVFINGGILLGYISNYAFSKVPLYLTWRLMLGIGAVPSVVLALVVLVMPESPRWLVMQGRLGEARKVLDKTSDSKEEALLRLADIKEAAGIPESCNDDVVQVSKQKRGGEGVWREMFVNPTPAVRHILIAGLGIHFFQQASGIDAVVLYSPTIFKKAGITSDTDQLLATVAVGFVKTLFILVATFTLDRFGRRPLLLSSFGGMIFSLTTLAVSLTIIDHSHTKLMWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLKLRAQGCAMGVVVNRVTSGVISMTFLSLSKAITIGGAFFLFGGIALVGWLFFFTMLPETQGKTLEEMEGSFGKFWRKSDAKGTNGNDNNGQIQLETNGRT 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00218 518 MobiDBLite consensus disorder prediction 496 518 - -
Bva13g00218 518 MobiDBLite consensus disorder prediction 499 518 - -
Bva13g00218 518 CDD MFS_PLT 33 485 IPR044776 GO:0005351
Bva13g00218 518 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 13 509 IPR045262 GO:0015144
Bva13g00218 518 ProSitePatterns Sugar transport proteins signature 2. 126 151 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bva13g00218 518 Pfam Sugar (and other) transporter 30 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva13g00218 518 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva13g00218 518 PRINTS Sugar transporter signature 121 140 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva13g00218 518 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva13g00218 518 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva13g00218 518 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva13g00218 518 SUPERFAMILY MFS general substrate transporter 16 486 IPR036259 -
Bva13g00218 518 PANTHER SUGAR TRANSPORTER 13 509 - -
Bva13g00218 518 ProSitePatterns Sugar transport proteins signature 1. 84 101 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bva13g00218 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 478 IPR020846 GO:0022857
Bva13g00218 518 Gene3D MFS general substrate transporter like domains 20 491 IPR036259 -
Bva13g00218 518 TIGRFAM SP: MFS transporter, sugar porter (SP) family 19 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00218 Bva-Chr13 1052994 1064109 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00218 17 515 Organic Solute Cotransporters AT3G18830 72.421 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00218 - - lja:Lj3g3v3338420.1 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00218 13 1052994 1064109 Bva13g00218 13 1052994 1064109 ECH
Bva13g00218 13 1052994 1064109 Bva14g00287 14 1479261 1482546 ECH