Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03258 ATGAGGACAGGATCcatgtctttttctttagtgCTAGTACCTAGATACAGAATACACAGCTTAGCTAATCACTGGGATGAATCTTTACATAATTTGAATAGGAATTATGGAAATAATTCAGGCATTAGGCTGCTGGATTCAAGAATTTATGGGCTTCAGGGAGGACATGGTAAGAAGTGGACTCGAAGACCTGTTACtacaaaaagagaaggaagtaACAAAACCAGCCGGAGCCCCAAATCAAGAAGTATCGAGCATGAAACTTTGAGTGAAACAATTTTAACAAGTGCCAcagaaaatgtaaataaaacagAACTAGGTCAACTCCAGGAAATTCAGTACTCTGACATACAAAAGGAGCTTGCTCAGAATAAAGATTTGACCAGCTTACTCactattattgtttttgataCTGAGACCACTGGCTTCATGAGAAAGGGAGATCGGATAATTGAGATTGCACTTCGAGATCTTCAGGGTGGCGAGAACAGCACTTTCCAGACTCTTGTAAATCCTCAACGCTATATCCTTAATTCGCATGTTCACGGTATTACAACTCAGATGGTCAACAAGCCTGATGTTCCTAGGATGGAGGACCTGATTCCTATCTTAATGAAGTATGTTCGAAGCCGAGAGAAAAGCGGAGGATATGTGTTGTGGGTTGCTCATAATGCTCGTACTTTTGATGTACCTTTCCTCATTAATGAATTTAGTCGATGTTCTACGGAGATCCCCCCTAATTGGCTGTTTGTGGATACCCTTCCTTTGGCTCGTGAAGTAATCAAGTTTAGAGGTACAGAACTTTCTTCCACATCCCTTCCCGCCCTTGCTGAGCTCTATAAAGTTAAGGTGGATGGATCAGCTCACAGGGCCATGGTAGATGTGAACAAATTGGCAATGATACTTCCAAAATTGACCTTTGATCTGAAATTGACCATCTCTGACCTTTTCGAAAGGTCGTTCAAGCCAGATTTGATCAACTttaggaggaagaagaatacAGACTA 1007 0.3823 MRTGSMSFSLVLVPRYRIHSLANHWDESLHNLNRNYGNNSGIRLLDSRIYGLQGGHGKKWTRRPVTTKREGSNKTSRSPKSRSIEHETLSETILTSATENVNKTELGQLQEIQYSDIQKELAQNKDLTSLLTIIVFDTETTGFMRKGDRIIEIALRDLQGGENSTFQTLVNPQRYILNSHVHGITTQMVNKPDVPRMEDLIPILMKYVRSREKSGGYVLWVAHNARTFDVPFLINEFSRCSTEIPPNWLFVDTLPLAREVIKFRGTELSSTSLPALAELYKVKVDGSAHRAMVDVNKLAMILPKLTFDLKLTISDLFERSFKPDLINFRRKKNTD 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03258 335 CDD DEDDh 134 302 - -
Bva13g03258 335 Pfam Exonuclease 134 301 IPR013520 -
Bva13g03258 335 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 3 331 IPR040393 GO:0008408
Bva13g03258 335 SMART exoiiiendus 132 311 IPR013520 -
Bva13g03258 335 MobiDBLite consensus disorder prediction 64 86 - -
Bva13g03258 335 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 3 331 - -
Bva13g03258 335 SUPERFAMILY Ribonuclease H-like 130 309 IPR012337 -
Bva13g03258 335 MobiDBLite consensus disorder prediction 55 86 - -
Bva13g03258 335 Gene3D - 131 315 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03258 Bva-Chr13 22613478 22616880 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03258 - - gmx:100807346 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03253 04 26335070 26337940 Bva13g03258 13 22613478 22616880 BWGD
Bva13g03258 13 22613478 22616880 Bva04g03253 04 26335070 26337940 ECH
Bva13g03258 13 22613478 22616880 Bva13g03258 13 22613478 22616880 ECH