Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03253 ATGAAGACAGGATccatgtttctttctttattgcaAGCACCTAGATGCAGAATACACAGCTTAGCTAATCATTGGGATGGATCTTTCCATTGTTTGAGTAAGAATTATGGAAATAATTCAAGCATTAGGTTGCTGGGTTCTAGAATTTTGGGGCCTCAGGGAGGATATGGCAGGAAGTGTTGTCAAAAACCTGTTactacaaaaacaaaaggaagtaGCCAAGCCACCCGGAGCCTCAACTCAAGAAGTATCAAGCATGAAACTCTTAGTGAAGCAATTTTAACAAGTGCCatagaaaatgtaaataaaagagaactAGGTCAATTTCAGGAAATTCAGTACTCTAATATACAAAAAGAGCTTGCTCAGAATAAAGATTTGACCAGCTTATTCactataattgtttttgatGCTGAGACCACTGGGTTCGGGCGAAAGAGTGATCGGATAATTGAGATTGCACTTCGAGATCTTCAGGGTGGTGAGAACAGCACTTTCCAGACTCTTGTAAATCCTCAACGCAATGTCCATAATTCACATGTTCATGGTATTACAGATCAGATGATCAACAAGCCTGATGTTCCTAGGATGGAGGACCTGATTCCCATCTTAATGCAGTATGTTCGGAGCCGTGAGAAACCTGGAGGATATGTGTTATGGGTTGCTCATAATGCTCGATCCTTTGACGTCCCTTTCCTTGTTAATGAATTTAATCGATGTTCTATAGAGATTCCCTCTAATTGGCGGTTTTTGGATACTCTTCCTTTGGGGCGTGAAGCGATCAAGTCTAAAGGAATAAAACTCACTTCCACATCCCTATCCTCCCTGACCAAGCTCTATAAGATTGAAGTGGATGGACCAGCTCACAGGGCCATGGTAGATGTGAACAGATTGTCAATGATacttccaaagttgaccaacgATCTGAGATTGACCATCTCTGACCTTTTCGAGAGGTCTTTCAGACCAGATTCAATTAACTCTACGAGCAAGTA 995 0.3789 MKTGSMFLSLLQAPRCRIHSLANHWDGSFHCLSKNYGNNSSIRLLGSRILGPQGGYGRKCCQKPVTTKTKGSSQATRSLNSRSIKHETLSEAILTSAIENVNKRELGQFQEIQYSNIQKELAQNKDLTSLFTIIVFDAETTGFGRKSDRIIEIALRDLQGGENSTFQTLVNPQRNVHNSHVHGITDQMINKPDVPRMEDLIPILMQYVRSREKPGGYVLWVAHNARSFDVPFLVNEFNRCSIEIPSNWRFLDTLPLGREAIKSKGIKLTSTSLSSLTKLYKIEVDGPAHRAMVDVNRLSMILPKLTNDLRLTISDLFERSFRPDSINSTSK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03253 331 SMART exoiiiendus 132 311 IPR013520 -
Bva04g03253 331 CDD DEDDh 134 295 - -
Bva04g03253 331 SUPERFAMILY Ribonuclease H-like 131 312 IPR012337 -
Bva04g03253 331 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 3 330 IPR040393 GO:0008408
Bva04g03253 331 Pfam Exonuclease 134 296 IPR013520 -
Bva04g03253 331 Gene3D - 131 316 IPR036397 GO:0003676
Bva04g03253 331 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 3 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03253 Bva-Chr4 26335070 26337940 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03253 - - gmx:100799702 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03253 04 26335070 26337940 Bva13g03258 13 22613478 22616880 BWGD
Bva13g03258 13 22613478 22616880 Bva04g03253 04 26335070 26337940 ECH
Bva04g03253 04 26335070 26337940 Bva04g03253 04 26335070 26337940 ECH