Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03232 ATGTACAAGCATTTTGTAAAGCATTATTATTCGATTCTTTTCCACCATCTGCGTTTGATTGTTGTGGTGAATCATCATCCTTTAGCGTTCTATGTAGCATCTGATATTAGCCATTATACTTTAAAGTTTCAACTTGCTCACTGCACAAGCACTgacagagagaaagaaaaaagagagagaaaggaggaGAGACACCAAAAAATGGGATCTCTGGGAGCTGAAACcgcaaagaagaaagcaatgTGGCTGTATCCAAAGGTGTTGGGTTTTAATCCTTCTGAAAGATGGGGGCACTCTGCTTGCTTCTCGGAGGGGCTTATGTACGTCTTTGGGGGATGTTGTGGGGGACTGCATTTTAGTGATGTTCTCACTCTAGACCTTGACAAAATGGCTTGGAGCAGACTTGCCACTACAGGTGAAAGACCTGGTCCTAGAGATAGCCACAGTGCTGTTCTCATAGGAAACAAGATGATTGTGTTTGGTGGCACAAATGGTTTCAAGAAGGTGAATGATCTTCATATACTGGATCTGGCAACCAGAGAGTGGGTTCGACCTGAATGTAAAGGGGTTCCTCCTTCTCCACGCGAAAGCCATACTGCCACACTTGTTGGCAATGAAAAATTAGTCATCTTTGGTGGTAGTGGAGAAGGTAACGCAAATTATCTAAATGATTTGCACATTCTAGATCTTCGAACCATGAGATGGAGTTCTCCTGAGGTGAAAGGTGACTTCCCTGTTCCTAGGGACAGTCACAGTACTCTTGCAATTGGGAACAAGCTTTTTGTGTATGGAGGCGATTCTGGCGATCAGTATCATGGCTATGTTAATATGCTTGATATGGATACCATGACTTGGTCAAGGTTGACAGTTCAAGGATCTTCCCCTGGTGTCCGAGCAGGTCATGCTGCAGTTAGTGTTGGAACTAAGATGTACATCATTGGAGGAGTTGGAGACAAACGTTATTACAGTGATGTTTGGATATTTGATGTCTGCAATTGTTCATGGAATCGACTTGATATATGTAGTCAGCAACCACAAGGGCGATTTTCTCATACAGCTGTTGTTGCAGAAATGGACATTGCCATATATGGAGGGTGTGGGGAAGATGAACGTCCTCTCAATGAATTGTTGGTATTGCAGCTTGGCGCAGAGCACCCAGATGGGCGTTACAACATTTCCATGTGCAAAGTTTTTGGCAGCTattggaaccaagaaaagagGGCTTTCCCAAGAGGAGCAGATACCGATTTGAAAAGCACACTTACTGGGAATAACGTGGAAGCTTTAGGAAGAGGAGCCTATGAATTTGTATCAGAAAAAAAGCatccttttcattttgactCCGATACTTGCCAACAGAAGAGGAGGAGAACTGCTGCTGTAAAGGTCTGGGATGTTGAATTAGAACAAGAAGAGCATTCTCTCTCACTGTCCCAGCATTCATCTCCATCACAGTCTGATCAGGAACAGACCCCAGCTCAAAAAGCCAATGTTTCTGTCATGGACTCTCAGCGATTTCTTCtgttaaaacaattaaatcaaattccaCCAGATAATGGCTCAAGTAACCAGAAAATGTCGAAGAATATCACCCAAAGAAGTCCACAGGATCTTCATTTTCAGAACCAACCAAAACAAGAACAGTATCTCCATGAGAATAAAAAGGGAATGCACTACCTAGCAATTGAGCAGAAATCCATGGACCGAGGACCCGTCCAACAACTGATGGGTGCCGAAGTACGAGGCACAGTCGATGGGGCCTTTGACTCGGGTTTCCTAATGACTGCAACTGTGAATGGCAGGATTTTCAGAGGAGTATTGTTTGCACCTGGAGCAGTAGCATCAAGGGGGGCCGTTCTGGAACCAAACTGTTTACCAAGTACAAATGCAGCATATATAAACTCGAATCACGTGGAAGCCTTGAGGCACTCTACGCAGCCAACGACTTGTTGCCGTCATGGGTCCCGGCAAGGGCAGGGCCAGGCTCAAGTGACTCGACCGTTTCCTATCACAAGAGCCACCACCCCCTCCGTGTCTAAAGAGCAGAAAGTCAAGAGTGATCTAAATGGCTTGGTTCTGACTCTCGGCGGTCCTGCTAGTGGCAACCATGCTGGATCCTA 2120 0.4307 MYKHFVKHYYSILFHHLRLIVVVNHHPLAFYVASDISHYTLKFQLAHCTSTDREKEKRERKEERHQKMGSLGAETAKKKAMWLYPKVLGFNPSERWGHSACFSEGLMYVFGGCCGGLHFSDVLTLDLDKMAWSRLATTGERPGPRDSHSAVLIGNKMIVFGGTNGFKKVNDLHILDLATREWVRPECKGVPPSPRESHTATLVGNEKLVIFGGSGEGNANYLNDLHILDLRTMRWSSPEVKGDFPVPRDSHSTLAIGNKLFVYGGDSGDQYHGYVNMLDMDTMTWSRLTVQGSSPGVRAGHAAVSVGTKMYIIGGVGDKRYYSDVWIFDVCNCSWNRLDICSQQPQGRFSHTAVVAEMDIAIYGGCGEDERPLNELLVLQLGAEHPDGRYNISMCKVFGSYWNQEKRAFPRGADTDLKSTLTGNNVEALGRGAYEFVSEKKHPFHFDSDTCQQKRRRTAAVKVWDVELEQEEHSLSLSQHSSPSQSDQEQTPAQKANVSVMDSQRFLLLKQLNQIPPDNGSSNQKMSKNITQRSPQDLHFQNQPKQEQYLHENKKGMHYLAIEQKSMDRGPVQQLMGAEVRGTVDGAFDSGFLMTATVNGRIFRGVLFAPGAVASRGAVLEPNCLPSTNAAYINSNHVEALRHSTQPTTCCRHGSRQGQGQAQVTRPFPITRATTPSVSKEQKVKSDLNGLVLTLGGPASGNHAGS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03232 706 MobiDBLite consensus disorder prediction 514 541 - -
Bva13g03232 706 Pfam Kelch motif 195 248 - -
Bva13g03232 706 Pfam Galactose oxidase, central domain 106 153 - -
Bva13g03232 706 PANTHER OS01G0300900 PROTEIN 68 702 - -
Bva13g03232 706 Gene3D - 188 408 IPR015915 GO:0005515
Bva13g03232 706 SUPERFAMILY Kelch motif 142 382 IPR015915 GO:0005515
Bva13g03232 706 MobiDBLite consensus disorder prediction 475 497 - -
Bva13g03232 706 Gene3D - 79 187 IPR015915 GO:0005515
Bva13g03232 706 PANTHER KELCH REPEAT DOMAIN 68 702 - -
Bva13g03232 706 MobiDBLite consensus disorder prediction 474 497 - -
Bva13g03232 706 Pfam Kelch motif 298 338 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03232 Bva-Chr13 22497727 22503568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03232 121 381 Acyl Lipid Metabolism Gene Families AT3G05420 29.242 4.46e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03232 K20285 - gmx:100801275 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03231 04 26229761 26233276 Bva13g03232 13 22497727 22503568 BWGD
Bva13g03232 13 22497727 22503568 Bva13g03232 13 22497727 22503568 ECH