Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03231 ATGTATTTCTCATTTCCTATCCCATGTGTCTCGTACTGTATTGAAGTTGAAGTAATACTAAAGTTTCAACTAGCTCAATACACGAGCACATACAGAATGGGATCTCTGGGAGCTGAAAccggaaagaagaaaacaatgtgGATGCATCCAAATGTTTTGGGTTTTAATCCTTCTGAAAGATGGGGCCATTCTGCTTGCTTCTTGGAGGGGCTTATGTATGTCTTTGGGGGATGTTGTCGGGGACAGCATTTTAGTGATGTTCTCACTCTAGACCTCGAGAAAATGGCTTGGAGCGGACTTGCTACTACGGGTGAAAGACCTGGTCCTAGGGATAGCCACAGTGCTGTTCTCGTAGGAAACAAGATGATTGTGTTTGGTGGCACAAATGGCTTCAAGAAGGTGAATGATATTCATATACTTGATCTTGCAACCAAACAGTGGATTCGACCTGAATGTAAAGGGTCTCCGCCTTCTCCGCGAGAAAGTCACACTGCCACACTCGTTGGCAATGAAAAATTAGTGATTTTTGGTGGTAGTGGAGAAGGTAatgcaaattatttaaatgatttgCATATTCTTGATCTTCGAACCATGAGATGGACTTCTCCTGAGGTGAAAGGTGATTATTTGCCTGTTCCTAGGGACAGTCACAGCACTCTTGCAATTGGTAACAAGCTCTTTGTTTATGGTGGGGACTCTGGTGATCAGTATCATGGAGATGTTAATGTGCTTGATATGGATACCATGACTTGGTCAAGGTTGACAGTTCGAGGATCTTCCCCTGGTGTCAGAGCAGGTCATGCAGCAGTCAGTATTGGAACTAAGATGTACATCATTGGAGGAGTTGGAGATAAACGTTATTATAATGATGTTTGGATCTTCGATGTCTGCAATTGTTCGTGGACTCAATGCGATATATATAGTCAGCAACCACAAGGGCGATTTTCTCATGTAGCTGTTGTTGCAGACACGGACATTGCCATATATGGAGGGTGTGGGGAGGATGAACGTCCTCTCAATGAATTGCTCGTATTGCAGCTTGGCTCAGACCATTATAACATTCCCATGTGCAAAGTTTTTGGGAGCTATTGGAATCAAGAAAAGAGGACTTTCCCAAGAGGAGCCTATGAATTTGTATCAGAAAAGAAGCAgccttttcattttgattcagATACTTGGCAACAGAAGAGGAGGAGAATTGCTGCTTCAAAGGTATGGGATGTTGAATCAGAACAAGAAGAGCATTCTCTCTCACTGTCACAGCATTCATCTCCATCACAGTCTGATCGGGAACAGACCCCAGCTCAAAAAGCCAATGCCTCTGTCATGGACTCTCAGGGATTTCTTCTGTTAAGACAGCAAAATCAAACTCCATCAGATAATGGGTCAAGTAACCAGAGAATGTGGAAGAACATCACCCAAAGGAGTCCACGCGATCTTCATTTTCCGAACCAACCAAGACAAGAACAGCATGTCCATGTTCATGAGGATAAGTCCATGGGAAGAGGACCCATCCAACAACTGATGGGTGCGGAAGTACGAGGGACAATTGATGGGGCTTTTGATTCAGGTTTCTTAATGACTGCCACTGTAAATGGCAGGATTTTCAGAGGAGTATTGTTTGCACCTGTGACTGGAGCCATTCTGGAGCGAAACTGCTGTTTACCAAGGACACGTTGCCGTTTTGGGTGCCGGCAGGGGCAGTATCAGGGCCAGGCTGAAGTGACTCCATTTCCAATCACGAGAGTCACCACCACCTCTGCATCTAAAGAGCAGAAAATCAAGAATGATCTTCCTGGCTTGGTTCTGACGCTTGGAGCTCCTGCTAGTGGTAACCACACTGGATCCTA 1850 0.4351 MYFSFPIPCVSYCIEVEVILKFQLAQYTSTYRMGSLGAETGKKKTMWMHPNVLGFNPSERWGHSACFLEGLMYVFGGCCRGQHFSDVLTLDLEKMAWSGLATTGERPGPRDSHSAVLVGNKMIVFGGTNGFKKVNDIHILDLATKQWIRPECKGSPPSPRESHTATLVGNEKLVIFGGSGEGNANYLNDLHILDLRTMRWTSPEVKGDYLPVPRDSHSTLAIGNKLFVYGGDSGDQYHGDVNVLDMDTMTWSRLTVRGSSPGVRAGHAAVSIGTKMYIIGGVGDKRYYNDVWIFDVCNCSWTQCDIYSQQPQGRFSHVAVVADTDIAIYGGCGEDERPLNELLVLQLGSDHYNIPMCKVFGSYWNQEKRTFPRGAYEFVSEKKQPFHFDSDTWQQKRRRIAASKVWDVESEQEEHSLSLSQHSSPSQSDREQTPAQKANASVMDSQGFLLLRQQNQTPSDNGSSNQRMWKNITQRSPRDLHFPNQPRQEQHVHVHEDKSMGRGPIQQLMGAEVRGTIDGAFDSGFLMTATVNGRIFRGVLFAPVTGAILERNCCLPRTRCRFGCRQGQYQGQAEVTPFPITRVTTTSASKEQKIKNDLPGLVLTLGAPASGNHTGS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03231 616 PANTHER OS01G0300900 PROTEIN 33 553 - -
Bva04g03231 616 SUPERFAMILY Kelch motif 105 350 IPR015915 GO:0005515
Bva04g03231 616 MobiDBLite consensus disorder prediction 417 441 - -
Bva04g03231 616 PANTHER KELCH REPEAT DOMAIN 33 553 - -
Bva04g03231 616 Gene3D - 39 152 IPR015915 GO:0005515
Bva04g03231 616 MobiDBLite consensus disorder prediction 411 441 - -
Bva04g03231 616 Gene3D - 153 405 IPR015915 GO:0005515
Bva04g03231 616 Pfam Galactose oxidase, central domain 119 167 - -
Bva04g03231 616 Pfam Galactose oxidase, central domain 71 117 - -
Bva04g03231 616 Pfam Galactose oxidase, central domain 170 222 - -
Bva04g03231 616 Pfam Galactose oxidase, central domain 313 347 - -
Bva04g03231 616 Pfam Kelch motif 264 304 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03231 Bva-Chr4 26229761 26233276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03231 146 355 Acyl Lipid Metabolism Gene Families AT3G05420 33.333 1.39e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03231 K20285 - gmx:100801275 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03231 04 26229761 26233276 Bva13g03232 13 22497727 22503568 BWGD
Bva04g03231 04 26229761 26233276 Bva04g03231 04 26229761 26233276 ECH