Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03215 ATGGCACCTGATATCACCACTGTTGCTGCTAACGCTGCCGCCACCCAAGCTAAGGGTACCGGGCAAAGGAGCTACGCTTACGTGACGTTTTTAGCTGGAAATGGCGACTATGTTAAGGGCGTGGTTGGTTTGGCCAAAGGTTTGAGGAAGGTTGAGAGCAAGTACCCGTTGGTTGTGGCTGTCTTGCCTGATGTTCCGGAGGAACACCGCCGGATTTTGGCCTCCCAAGGTTGCCTTGTCAGGGAAATAGAGCCTGTCTATCCACCTTCCAACCAGACACAGTTTGCAATGGCCTACTATGTCATCAATTACTCTAAGCTCCGCATCTGGGAGTTTGTGGAGTATGATAAGATGATTTACTTGGACGGGGATATCCAAGTGTTTGACAGCGTGGATCACCTCTTTGACTTGCCAGACAAGTACTTCTATGCAGTCATGGACTGTTTCTGCGAGAAAACTTGGAGCCACACTCCTCAATACCAGATTGGCTACTGTCAGCAGTGCCCTGACAAGGTTCAATGGCCCTCTTACTTGGGACCCAAGCCTGCTCTCTACTTCAATGCTGGCATGTTTGTTTATGAGCCTGATCTTAACACCTACGAGGACCTTCTCAAGACCCTCAAAATTACAACTCCTACCCCTTTTGCCGAACAGgACTTTCTGAATATGTACTTCAATCACATATACAAGCCCATTCCAAATGTTTACAACCTTGTGCTGGCCAATCTGTGGCGCCACCCAGAGAATGTCAAGCTTGACCGAGTCAAAGTGGTTCACTACTGTGCTGCTGGGTCGAAGCCATGGAGGTACACTGGCGTTGAGGAAAACATGGACAGAGAAGACATAAAAATGCTGGTGAAGAAATGGTGGGACATTTACGAGGATGAATCTTTGGACTACAAGTCTAGCATCAATTTGGGTGCTTTCCAGGATGCGATTTCGGAGGCTGGTGTTAAATATGTTTCGGCCCCATCCGCTGCCTA 983 0.4842 MAPDITTVAANAAATQAKGTGQRSYAYVTFLAGNGDYVKGVVGLAKGLRKVESKYPLVVAVLPDVPEEHRRILASQGCLVREIEPVYPPSNQTQFAMAYYVINYSKLRIWEFVEYDKMIYLDGDIQVFDSVDHLFDLPDKYFYAVMDCFCEKTWSHTPQYQIGYCQQCPDKVQWPSYLGPKPALYFNAGMFVYEPDLNTYEDLLKTLKITTPTPFAEQDFLNMYFNHIYKPIPNVYNLVLANLWRHPENVKLDRVKVVHYCAAGSKPWRYTGVEENMDREDIKMLVKKWWDIYEDESLDYKSSINLGAFQDAISEAGVKYVSAPSAA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03215 327 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Bva13g03215 327 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 327 - -
Bva13g03215 327 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 301 IPR029044 -
Bva13g03215 327 PANTHER GALACTINOL SYNTHASE 2 1 327 - -
Bva13g03215 327 CDD GT8_Glycogenin 25 295 - -
Bva13g03215 327 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 301 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03215 Bva-Chr13 22419538 22421008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03215 1 327 Glycosyltransferase AT1G56600 74.852 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03215 K18819 - gmx:548050 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03222 04 26181598 26183181 Bva13g03215 13 22419538 22421008 BWGD
Bva13g03215 13 22419538 22421008 Bva13g03215 13 22419538 22421008 ECH