Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03222 ATGGCACCTGATATCACCTCCGCTGCCGTCAACGCTGCCGTGGCCCAAGCCAAGGGTACTGGGCAAAGGAGCTACGCCTATGTGACATTTTTGGCTGGAAATGGGGACTATGTTAAGGGCGTGGTCGGTTTAGCCAAGGGTCTGAGAAAGGCCGAGAGCAAGTACCCGCTGGTTGTGGCTGTTTTACCTGATGTTCCTGAGGAACACCGCAAGATTCTGGTGTCCCAGGGTTGCATCGTCAGGGAAATCGAGCCTGTATATCCACCTTCCAATCAGACCCAGTTTGCAATGGCCTACTATGTCATTAATTACTCTAAGCTCCGTATTTGGGAGTTTGTGGAGTATGATAAGATGGTTTACCTGGACGGGGATATCCAAGTGTTTGACAACATTGATCACCTCTTTGACTTGCCTGATAAGTTCTTCTATGCTGTTATGGACTGTTTCTGTGAAAAGACTTGGAGCCACACCCCACAATACCAGATTGGCTACTGCCAGCAGTGCCCTGAGAAGGTTCAATGGCCCTCTGATTTTGGACCCAAACCTTCTCTTTACTTCAATGCTGGCATGTTCGTTTATGAGCCTAATCTCAACACTTATGAGGACCTTCTCAAGACCCTCAAAGTTACCACTCCTACCCCTTTTGCTGAACAGGACTTACTGAACATGTACTTCAATCACATTTACAAGCCCATACCGAATGTTTACAACCTTGTTTTGGCCAATCTGTGGCGTCATCCAGAGAATGTCAAGCTCAACCAAGTGAAAGTGGTTCACTATTGTGCTGCTGGTTCAAAACCATGGAGGTACACTGGGGTTGAAGAAAACATGGACAGAGAAGACATAAAAATGCTGGTGAAGAAATGGTGGGACATATACGATGATGAATCCTTGGACTACAAGTCTGGTGTCAATTTGGATATTATCCAGGAGGCGCTCTCGGAGGCTGGCGTCAAATATGTGTCAGCCCCATCTGCAGccta 983 0.471 MAPDITSAAVNAAVAQAKGTGQRSYAYVTFLAGNGDYVKGVVGLAKGLRKAESKYPLVVAVLPDVPEEHRKILVSQGCIVREIEPVYPPSNQTQFAMAYYVINYSKLRIWEFVEYDKMVYLDGDIQVFDNIDHLFDLPDKFFYAVMDCFCEKTWSHTPQYQIGYCQQCPEKVQWPSDFGPKPSLYFNAGMFVYEPNLNTYEDLLKTLKVTTPTPFAEQDLLNMYFNHIYKPIPNVYNLVLANLWRHPENVKLNQVKVVHYCAAGSKPWRYTGVEENMDREDIKMLVKKWWDIYDDESLDYKSGVNLDIIQEALSEAGVKYVSAPSAA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03222 327 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Bva04g03222 327 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 299 IPR029044 -
Bva04g03222 327 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 300 IPR029044 -
Bva04g03222 327 PANTHER GALACTINOL SYNTHASE 2 1 327 - -
Bva04g03222 327 CDD GT8_Glycogenin 25 295 - -
Bva04g03222 327 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03222 Bva-Chr4 26181598 26183181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03222 1 327 Glycosyltransferase AT1G56600 75.740 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03222 K18819 - egr:104428234 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03222 04 26181598 26183181 Bva13g03215 13 22419538 22421008 BWGD
Bva04g03222 04 26181598 26183181 Bva04g03222 04 26181598 26183181 ECH