Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03199 ATGGCAAAGGAAGCTCCTTTAcgcctcttctttttctctcttctcgtTTTCTGTTCTTCGGGAACTTTGTTGGGTTTTTCGTATCGTGAAAGAGGGGAAACTGCAACTCCAGCGCTTGCCGAAACGATATCATTCCTCGAGCAAAATAAGGTTTCCCCATCTCAGATTCGAATTTTTGTCACAGATCATAGGGTTTTAAGCACTCTGAAAAACTCGGAAGTGTCAATTGATTTCTACTTGAATAAAAGTCTGGTTAAACATTTGATTAGTGCAAAACCATCTGCCCTTTCATGGCTAAAAACCAATCTAATTGACTTTCTTCCCCAAGTAAACATCAAAAGCATCATGGCTACCTGTGGCTATGAGTGTTTTGGCCATAATGAGACTCCTTTGCTGGTATCTGCTTTAGGATCTATTCATTCAGTTCTTAGTAAGTTTCATTTAGGCAGGGAAGTAAAGGTCTCAGTAGCATTTTCTCTGCCATTCCTTGAGAAGTTGAATAAATCTCATGAAAATGACCTTCGTAGGATTTTTTCCTTCGTAAAGAAAACGAACTCCTTTATCACGATAGAAGATAGCATTGATGGGGCATTAAGCATGGGGGATCAGTTTATCCACTATGTAACTGAAAGGGCCGCCATTGCTGCTTCTATTCTTCCTTGCAAAAATGTTCCCATGGTTCTGACAATGAAAAGCTCAGTTATTCCAAGTTCAGTGGAAGTAGCCCAATTTAGTGACAAGGTGTCCAAAAAACTTGAAGCAAACACTCAAATTACTGATAGGATACTTGCATTATATGCGGAAGTACATGCAACGGAAGATTTTGCCCAGAAAGAGATGAAAAgggaagaggaagagatatttcctttttatcgCAGAGAAATCCTCAGCAAATTCCTCACGAGAAGAACTCTGGATGATACGACCAACCCAGCAACAACAGTTTTCCCCACACCGTCAACACCAACCACACTGATGACACCACCAGATGCACCAACCATCATCACTGTTCCCGCAACTAACCCTGTCACAGTTTCACCAACCAATCCAGCTGCAGTGCCTGTAACAGTTCCTTCCACCACCCCTGTGCCGTTAGCTCCCACAAATCCGGCAAGTACGCCTGTACCGGTTGTTAATCCAGTTCCAATGCCGACTCCAATAACAGTTCCAGGGTCACAACCAATAACCAACCCCGCAGCATCTTATCCACCCCCAAGTGTTCCTCTCTCAATCCCAGTTGCACCTCCTGCTAACACAAATGCTCCGGCCACTGCGGGGCAGAGCTGGTGCGTGGTCAGGACTGGAGCTCCAGAAACTGCTCTTCAGTCAGCGCTGGACTATGCTTGTGGAATGGGTGGTGCCGATTGTTCACAAATACAACCAGGTGGGAACTGTTACAACCCAAACACTCTGCAAAACCATGCTTCTTTTGCCTTCAATAGCTACTACCAAAAGAATCCAGTAGCAACAAGTTGTGACTTTGGAGGGTCTGCCACCGTAGTTAATGCCAATCCAAGCACGGGCTCTTGCATTTATGCATCATCTTCAACACCAACAACGTCATCGTCATCGTCGATGCCAACGCCAACAACATCTTCCTCAACAACTCCAATTCCAACCCCAGCGACGTCGTCATCATCAAGCTATGGCAGTGGCACCCCACCTTCAGTATTAAATTCAAGCAATCCAGCGTCATCAGATACCACGCCAATTTTCGGGTCTGAAACCCCTCCTGTTGCAAATAGCTCGACGGCATCCCATTCAGCTGGTCTGCAACCTTTTGTTGGCTGGATGATTCTGGTCATATCACTTGTCACTGGAAGACACTATTTGCTTGCATA 1841 0.4373 MAKEAPLRLFFFSLLVFCSSGTLLGFSYRERGETATPALAETISFLEQNKVSPSQIRIFVTDHRVLSTLKNSEVSIDFYLNKSLVKHLISAKPSALSWLKTNLIDFLPQVNIKSIMATCGYECFGHNETPLLVSALGSIHSVLSKFHLGREVKVSVAFSLPFLEKLNKSHENDLRRIFSFVKKTNSFITIEDSIDGALSMGDQFIHYVTERAAIAASILPCKNVPMVLTMKSSVIPSSVEVAQFSDKVSKKLEANTQITDRILALYAEVHATEDFAQKEMKREEEEIFPFYRREILSKFLTRRTLDDTTNPATTVFPTPSTPTTLMTPPDAPTIITVPATNPVTVSPTNPAAVPVTVPSTTPVPLAPTNPASTPVPVVNPVPMPTPITVPGSQPITNPAASYPPPSVPLSIPVAPPANTNAPATAGQSWCVVRTGAPETALQSALDYACGMGGADCSQIQPGGNCYNPNTLQNHASFAFNSYYQKNPVATSCDFGGSATVVNANPSTGSCIYASSSTPTTSSSSSMPTPTTSSSTTPIPTPATSSSSSYGSGTPPSVLNSSNPASSDTTPIFGSETPPVANSSTASHSAGLQPFVGWMILVISLVTGRHYLLA 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03199 613 Coils Coil 266 286 - -
Bva13g03199 613 Pfam Glycosyl hydrolases family 17 25 188 IPR000490 GO:0004553|GO:0005975
Bva13g03199 613 Gene3D Glycosidases 24 193 - -
Bva13g03199 613 SMART X8_cls 428 512 IPR012946 -
Bva13g03199 613 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 145 591 - -
Bva13g03199 613 Gene3D - 423 526 - -
Bva13g03199 613 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 145 591 IPR044965 GO:0004553|GO:0005975
Bva13g03199 613 MobiDBLite consensus disorder prediction 514 585 - -
Bva13g03199 613 Pfam X8 domain 429 499 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03199 Bva-Chr13 22342817 22345418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03199 385 510 Glycoside Hydrolase AT2G05790 49.606 3.17e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03199 - - gmx:100794910 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03206 04 26105958 26108700 Bva13g03199 13 22342817 22345418 BWGD
Bva13g03199 13 22342817 22345418 Bva13g03199 13 22342817 22345418 ECH