Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03206 ATGGCGAAGGAAGCTCCTTTAtgcctcttctttctctcccttttcATTGTCTATTCTTCGGGAACTTTGTTGGGTTTTTCCCATCGTGAAAGAGGGGAAACTGCAGCTCCAGCTTATGCTGAAACGCTAACATTCCTCGAGCGAAATAAGGTTTCCCCATCTCAGATTCGAGTTTTTGTCACAGAACATAGCATCTTGAGCACTCTGAAAAACTCGGACGTGTCAGTTGATGTTTACTTGAATAAAAGCCTGGTTAAACATTTAATTGATTCAAAACCATCTGCACTTTCATGGCTGAAAACCCATCTACTTGACTTTCTTCCACATGTAAACATCAAAAGCATCATAGCTACTTGTGGCATTGAGTGCTTTGGCCAAAATGAGACACCTTTGCTTGTATCTGCTTTAGGGTCAATTCATTCAGTTCTTAGTAAGTTTCATTTAGGCAGGGAGGTGAAAATCTCAATAGCATTTTCACTGTCATTGCTTGAGAAGTTGAGTAAATCTCATGAAAATAACCTTCATAGGattctttctttcataaaGAAAACGAACTCATTTGTCATGATCGAAGATAGCATTGATGGGGAATTAAGCACGGGGGATCACTTTGTCCACTATATAATTGAAAGGGCCAGTATTGCTGCTTCTGTTCTTTCTTGCCAAGACGTCCCCATTGTTCTGAATATTAAGAGCTCAGCTGTTCCGAGTTCAATGGAAGTAGCCCAATTCAGCAACAGGGTATCCAAATATCGTGAAGCAGACACTGAAGTCACTGGCAGGATAGTTGCATTATACGTAGAAAAACAAGCAACAGAAGACTTTGCAGAGAAACAGATTAAAAgggaagaggaagagatatttccttcttttcacaGAGAAGTCCTCAGCAAAATCCTCAGGAGAAGAAGGCTGCATGATACAACCAACGCAGCAACCACGGTTTTCCTCACACCTCCAACACAAACCACCACACCTGTGATGACACCCTCTGATAGACCAACCATCATCACTGTTCCTGCCACCAACCCTATCACAGTTTCCCCTACCAATCCAGCTGTATTGCCCGTGTCAATTCCTTCCACCACCCCTGTGCCATTATCTCCCACAAATCCGGCAACAACCCCGGTACCGGTTGTCAATGCAGTTCCACCGCCGACACCAATTACAGTTCCAGGATCACAACCTGCAACCAACCCTGTGACCTCATATCCACCCCCAAGTGTTCCTGTCACAAACCCAGTAGCTCCTCCTGCTAACACAAATGTTCCTGTCACAAACCCAGTAGCACCTCCTGCCAACACAAATGCTCCTGCAACAGGGAAAGGCTGGTGTGTGGCCAAGACTGGAGTTGCAGCAACTGCTCTTCAAGCAGCACTGGATTATGCTTGTGGAAAAGGTGGTGCAGATTGTTCTCAAATCCAACAGGGTGGGAACTGTTACAACCCCAACACTCTGCAAAACCATGCTTCTGTTGCCTTCAATAGCTACTACCAAAAGAATCCAACAGCAACAAGCTGTGACTTTGGAGGGACTGCCACCATAGTTAACACCAATCCAAGCACGGGTTCTTGCATTTACGCATCATCTTCAACACCAACAACATCGTCAACGCCACCGCCAACACCAAAAACGTCGTCAACACCGCCAACATCTTCGTCATCAACTTCAATTCCAACCCCAACAACGTCGTCATCATCAGGCTTTGGTTCCCCACCTTCAGTGTTAAATTCAAGCAACCCAGCATCATCAGGTTCAGGTATCATGCCAGGTTTCGGGTCTGAAACTCCTGTTGTGAATACAACGACGGCATCCCATTCAGCTGGTCTGCAACCGTTTGTTGGCTGCATATTTCTGGTCGTATCACTGGTCAATGGACAACTCAATTTGCTTCCATA 1898 0.4368 MAKEAPLCLFFLSLFIVYSSGTLLGFSHRERGETAAPAYAETLTFLERNKVSPSQIRVFVTEHSILSTLKNSDVSVDVYLNKSLVKHLIDSKPSALSWLKTHLLDFLPHVNIKSIIATCGIECFGQNETPLLVSALGSIHSVLSKFHLGREVKISIAFSLSLLEKLSKSHENNLHRILSFIKKTNSFVMIEDSIDGELSTGDHFVHYIIERASIAASVLSCQDVPIVLNIKSSAVPSSMEVAQFSNRVSKYREADTEVTGRIVALYVEKQATEDFAEKQIKREEEEIFPSFHREVLSKILRRRRLHDTTNAATTVFLTPPTQTTTPVMTPSDRPTIITVPATNPITVSPTNPAVLPVSIPSTTPVPLSPTNPATTPVPVVNAVPPPTPITVPGSQPATNPVTSYPPPSVPVTNPVAPPANTNVPVTNPVAPPANTNAPATGKGWCVAKTGVAATALQAALDYACGKGGADCSQIQQGGNCYNPNTLQNHASVAFNSYYQKNPTATSCDFGGTATIVNTNPSTGSCIYASSSTPTTSSTPPPTPKTSSTPPTSSSSTSIPTPTTSSSSGFGSPPSVLNSSNPASSGSGIMPGFGSETPVVNTTTASHSAGLQPFVGCIFLVVSLVNGQLNLLP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03206 632 SMART X8_cls 443 527 IPR012946 -
Bva04g03206 632 Coils Coil 266 286 - -
Bva04g03206 632 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 145 608 IPR044965 GO:0004553|GO:0005975
Bva04g03206 632 Gene3D - 440 538 - -
Bva04g03206 632 MobiDBLite consensus disorder prediction 548 589 - -
Bva04g03206 632 Gene3D Glycosidases 26 192 - -
Bva04g03206 632 Pfam X8 domain 444 514 IPR012946 -
Bva04g03206 632 Pfam Glycosyl hydrolases family 17 38 189 IPR000490 GO:0004553|GO:0005975
Bva04g03206 632 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 145 608 - -
Bva04g03206 632 MobiDBLite consensus disorder prediction 528 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03206 Bva-Chr4 26105958 26108700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03206 422 525 Glycoside Hydrolase AT4G26830 51.818 4.49e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03206 - - gmx:100794910 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03206 04 26105958 26108700 Bva13g03199 13 22342817 22345418 BWGD
Bva04g03206 04 26105958 26108700 Bva04g03206 04 26105958 26108700 ECH