Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03120 ATGGAGACCTTTCTATTCACTTCTGAATCTGTCAACGAGGGTCACCCTGACAAACTGTGTGACCAGATCTCGGATGCAGTGCTCGATGCCTGCCTTGAACAGGACCCTGAAAGCAAGGTTGCCTGCGAGACATGCACCAAGACTAACATGGTCATGGTCTTTGGAGAGATTACAACCAAGGCCAATGTTGACTATGAGAAGATTGTCCGTAACACATGCCGTACTATTGGATTTGTCTCTGATGATGTGGGTCTTGACGCTGACAAATGCAAGGTCTTGGTAAACATTGAGCAGCAGAGTCCTGATATTGCCCAAGGTGTTCATGGCCATTTTACCAAGCGCCCAGAGGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGGTATGCCACTGATGAAACCCCTGAATATATGCCATTGAGTCATGTCCTTGCAACTAAGCTAGGAGCTCGACTTACTGAGGTTAGAAAGAATGGTACCTGCGCTTGGCTGAGACCTGATGGCAAGACACAAGTAACAGTCGAGTACTACAATGACAAAGGTGCTATGGTTCCCGTTCGTGTCCACACTGTCCTTATTTCCACCCAGCATGACGAGACTGTCACTAATGACCAAATTGCTGCTGATCTTAAGGAGCATGTCATCAACCCCGTCATCCCTGAAAAGTACCTAGATGACAAGACCATCTTCCACCTAAACCCTTCTGGTCGCTTTGTCATTGGTGGTCCTCACGGTGATGCCGGTCTCACTGGACGTAAGATTATCATTGATACTTATGGTGGCTGGGGTGCCCATGGTGGTGGTGCTTTCTCTGGCAAGGATCCTACTAAGGTTGACAGAAGCGGTGCCTATGTTGCCAGGCAGGCCGCTAAGAGTATTGTGGCAAATGGACTTGCCCGTAGGTGCCTTGTGCAAGTTTCATATGCGATTGGTGTTCCTGAGCCCTTGTCAGTTTTTATTGACTCTTATGGAACTGGAAAGATACCTGACAAGGAAATTCTTCAGCTTGTGAAGGAGAACTTCGACTTTAGGCCTGGAATGATCACCATTAACTTGGACCTTAAGAGGGGTGGCCATAGGTTCCTTAAAACAGCTGCTTACGGACACTTTGGAAGGGACGACCCAGACTTCACCTGGGAAGTTGTGAAGCCACTAAAGGTGGAGAAGCCTCAATCTTA 1178 0.4822 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRNTCRTIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDQIAADLKEHVINPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFIDSYGTGKIPDKEILQLVKENFDFRPGMITINLDLKRGGHRFLKTAAYGHFGRDDPDFTWEVVKPLKVEKPQS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03120 392 Hamap S-adenosylmethionine synthase [metK]. 2 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Bva13g03120 392 Gene3D - 4 242 - -
Bva13g03120 392 SUPERFAMILY S-adenosylmethionine synthetase 240 387 IPR022636 GO:0004478|GO:0006556
Bva13g03120 392 ProSitePatterns S-adenosylmethionine synthase signature 2. 266 274 IPR022631 GO:0004478|GO:0006556
Bva13g03120 392 Gene3D - 117 380 - -
Bva13g03120 392 Pfam S-adenosylmethionine synthetase, N-terminal domain 4 101 IPR022628 GO:0004478|GO:0006556
Bva13g03120 392 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 4 1 391 - -
Bva13g03120 392 Pfam S-adenosylmethionine synthetase, C-terminal domain 240 380 IPR022630 GO:0004478|GO:0006556
Bva13g03120 392 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 1 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Bva13g03120 392 SUPERFAMILY S-adenosylmethionine synthetase 3 109 IPR022636 GO:0004478|GO:0006556
Bva13g03120 392 Pfam S-adenosylmethionine synthetase, central domain 117 238 IPR022629 GO:0004478|GO:0006556
Bva13g03120 392 SUPERFAMILY S-adenosylmethionine synthetase 115 239 IPR022636 GO:0004478|GO:0006556
Bva13g03120 392 TIGRFAM metK: methionine adenosyltransferase 5 386 IPR002133 GO:0004478|GO:0005524|GO:0006556
Bva13g03120 392 ProSitePatterns S-adenosylmethionine synthase signature 1. 119 129 IPR022631 GO:0004478|GO:0006556
Bva13g03120 392 PIRSF MAT 1 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Bva13g03120 392 CDD S-AdoMet_synt 5 383 - -
Bva13g03120 392 Gene3D - 11 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03120 Bva-Chr13 21941923 21944527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03120 K00789 - gmx:100777770 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03140 04 25767096 25769729 Bva13g03120 13 21941923 21944527 BWGD
Bva13g03120 13 21941923 21944527 Bva13g03120 13 21941923 21944527 ECH
Bva05g01217 05 6347736 6350061 Bva13g03120 13 21941923 21944527 ECH