Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03045 ATGGCTTCCATTAGTGTTCCGAGCTCGTCCCTCGTGGCTTTCTTCGTTGTGCTCGTCGTCGGCACCGGCGAGGCACGTGACCCATTTGCCTGTGACCCCAAAGATGGCAACACCAAGAACTTGCCCTTCTGCCGTGTTTCGCTGCCGATATCGGAGAGAGTGAAGGACCTCATTGGCAGATTGACACTGCAAGAGAAGGTTAGCTTGCTGGTCGACAATGCAGCGCCGGTTCCACGCCTTGGGATCAAAGGCTATGAATGGTGGTCTGAAGCGCTTCATGGGGTTTCCAATGTGGGCCCTGGGACTAAGTTTACCGGCCCATTCCCCGCCGCCACCAGTTTCCCTCAGGTCATCACCACCGCCGCTACTTTCAATGCATCCTTGTGGGAGGCAATCGGACGGGTTGTGTCAGACGAAGCAAGAGCAATGTACAACGGAGGAACGGCTGGGCTCACGTATTGGAGCCCGAACGTGAACATTTTCAGGGACCCAAGGTGGGGACGAGGGCAGGAAACTCCCGGTGAAGACCCCGTCTTAGCCGGTAGATATGCTGCGAATTACGTGAAGGGACTACAGGGAACGGACGGTAATCGGTTGAAGGTGGCCGCTTGTTGCAAGCACTTTACGGCTTACGACCTTGATAATTGGAACGGGGTCGATCGGTTTCACTTTAACGCACAGGTTAGCAAGCAGGACATAGAGGATACGTTCGATGTGCCATTCAGGATGTGTGTGAAGGAAGGCAAAGTGGCCAGCGTCATGTGTTCCTACAATCAAGTAAATGGTGTCCCTACCTGTGCGGACCCCAATCTCTTAAAGAAAACAGTGCGTGCTCAATGGCGTCTTGATGGGTACATTGTATCAGACTGTGATTCTGTCGGGGTGTTTTACAGCAACCAACATTATACAAAAACCCCAGAAGAAGCAGCTGCCGATGCCATTAAAGCAGGTTTGGATTTGGACTGTGGGCCTTTCCTGGGATTGCACACCCAGGATGCAGTTAAAAAAGGGTTGCTAACCGAAACTGACGTGAATGGTGCTTTGGTGAACACGCTAAGTGTCCAAATGAGACTAGGGATGTTCGATGGTTCTGACCCTTATGGCAATCTGGGACCAAGAGACGTGTGCAGCCCTGCTCACCAAGAGCTGGCCCTTGAAGCTGCCAGACAAGGAATTGTACTCCTTAAAAACACTGGACCTTCTTTGCCCCTCTCCCCACGCCGTCACCGTACTGTAGCAATCATTGGGCCCAACTCTAACGTTACCGTTACCATGATCGGCAACTATGCAGGCATTGCTTGTGGATACACCAGTCCTCTGCAAGGAATAGAGAGACACGCTGAGACAATTCACCAACTTGGGTGTGTGGATGTGGCCTGCAAGGATGACAAACAATTCCAAGCAGCCATTGATGCAGCCCGTCAAGCAGATGCAACGGTTCTTCTAATGGGCCTGGACCAGTCCATTGAGGCCGAAACCGTGGACAGGGCCGGTCTCCTCCTTCCTGGGCGTCAACAAGACCTTGTGTCCAAAGTGGCAGCCGCCTCTAAGGGACCCACCATATTGGTCTTGATGTCCGGTGGGCCTGTCGACGTAACTTTTGCAAAGAATGATCCGGGTGTTAAGGGCATCTTATGGGCTGGTTATCCTGGCCAAGCTGGTGGTGCTGCCATCGCAGACATCCTGTTCGGAGCCGCCAACCCAGGGGGCAAGCTCCCAGTGACATGGTACCCACAAGAGTACCTTACAAACTTGGCAATGACAAATATGGCAATGAGAGCAAGCCGATCCACAGGGTACCCAGGAAGAACGTATAGATTTTACCAGGGTCCAGTCGTTTACCCTTTTGGGCACGGGTTGAGCTATACCCACTTCGTTCATACATTAGCAAGTGCCCCAACAGTGGTGTCGGTTCCCTTGGATGGCCACCGCAAGGGCAATAGTAGTAGCAATATTTCAAACAAGGCAATTAGAGTGACACATGCTAGATGTGGTAAGCTCTCAATTAGCCTCCACGTGGACGTTAAAAATGTGGGGTCCATGGACGGTACTCACACATTGTTGGTGTTCTCGGCACCACCTGCCGGCGGCGGCCATTGGGCACCGCAGAAGCAACTGGGAGCATTTGAGAAAGTGCACGTCCCCGCCAAGTCTCAGCAGCGAGTCCAAGTCAACATTCATGTGTGCAAGTTCCTAAGTGTTGTGGACAAATCCGGAATTCGAAGAATTCCAATGGGGCAACACAGTATTCACATTGGTGATGTGAAGCACTCCGTATCACTTCAAGCACAAACACTTGGGATTatcaaatctta 2315 0.5197 MASISVPSSSLVAFFVVLVVGTGEARDPFACDPKDGNTKNLPFCRVSLPISERVKDLIGRLTLQEKVSLLVDNAAPVPRLGIKGYEWWSEALHGVSNVGPGTKFTGPFPAATSFPQVITTAATFNASLWEAIGRVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGRYAANYVKGLQGTDGNRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLKKTVRAQWRLDGYIVSDCDSVGVFYSNQHYTKTPEEAAADAIKAGLDLDCGPFLGLHTQDAVKKGLLTETDVNGALVNTLSVQMRLGMFDGSDPYGNLGPRDVCSPAHQELALEAARQGIVLLKNTGPSLPLSPRRHRTVAIIGPNSNVTVTMIGNYAGIACGYTSPLQGIERHAETIHQLGCVDVACKDDKQFQAAIDAARQADATVLLMGLDQSIEAETVDRAGLLLPGRQQDLVSKVAAASKGPTILVLMSGGPVDVTFAKNDPGVKGILWAGYPGQAGGAAIADILFGAANPGGKLPVTWYPQEYLTNLAMTNMAMRASRSTGYPGRTYRFYQGPVVYPFGHGLSYTHFVHTLASAPTVVSVPLDGHRKGNSSSNISNKAIRVTHARCGKLSISLHVDVKNVGSMDGTHTLLVFSAPPAGGGHWAPQKQLGAFEKVHVPAKSQQRVQVNIHVCKFLSVVDKSGIRRIPMGQHSIHIGDVKHSVSLQAQTLGIIKS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03045 771 Gene3D - 378 623 IPR036881 GO:0004553|GO:0005975
Bva13g03045 771 Pfam Glycosyl hydrolase family 3 N terminal domain 109 349 IPR001764 GO:0004553|GO:0005975
Bva13g03045 771 SMART Fn3_like_2 685 756 IPR026891 -
Bva13g03045 771 Gene3D - 53 367 IPR036962 GO:0004553|GO:0005975
Bva13g03045 771 Gene3D Immunoglobulins 647 769 IPR013783 -
Bva13g03045 771 Pfam Fibronectin type III-like domain 687 754 IPR026891 -
Bva13g03045 771 Pfam Glycosyl hydrolase family 3 C-terminal domain 392 622 IPR002772 GO:0004553|GO:0005975
Bva13g03045 771 PRINTS Glycosyl hydrolase family 3 signature 201 217 IPR001764 GO:0004553|GO:0005975
Bva13g03045 771 PRINTS Glycosyl hydrolase family 3 signature 114 133 IPR001764 GO:0004553|GO:0005975
Bva13g03045 771 PRINTS Glycosyl hydrolase family 3 signature 275 293 IPR001764 GO:0004553|GO:0005975
Bva13g03045 771 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 392 625 IPR036881 GO:0004553|GO:0005975
Bva13g03045 771 SUPERFAMILY (Trans)glycosidases 41 391 IPR017853 -
Bva13g03045 771 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 12 767 - -
Bva13g03045 771 PANTHER SUGAR HYDROLASE-RELATED 12 767 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03045 Bva-Chr13 21618100 21621853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03045 24 771 Glycoside Hydrolase AT1G02640 75.233 0.0 1187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03045 - - gmx:100789316 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03083 04 25493063 25497609 Bva13g03045 13 21618100 21621853 BWGD
Bva13g03045 13 21618100 21621853 Bva13g03045 13 21618100 21621853 ECH