Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03083 ATGGCTCCCACAAGTATGCCATGCCCATGCTCGTCCCTTGTAGCTTTATTCGTTGTACTCGTCTTGGCTGTCACGGGCGGCGAGGCACGTGACCCATTTGCCTGTGACCCCAGAGATGTCAACAACAAGAACTTGCCGTTCTGCCGCGTTTCCGTGCCGATAGCGGAGAGAGTGAAGGATCTCATTGGGAGGTTGACACTGCAAGAGAAGGTTAGCTTGCTGGTGGACAATGCAGCGCCGGTTCCCCGCCTTGGGATCAAAGGCTATGAATGGTGGTCTGAAGCACTCCATGGGGTTTCCAATGTGGGCCCTGGGACTAAGTTTACTGGCCCATTCCCTGCCGCCACCAGCTTCCCTCAGGTCATCACCACTGCCGCTTCTTTCAATGCATCTTTGTGGGAGGCAATCGGACGGGTTGTGTCAGACGAAGCAAGAGCAATGTACAACGGAGGATCGGCCGGGCTCACGTATTGGAGCCCCAATGTGAACATTTTCAGAGATCCAAGGTGGGGACGCGGACAGGAAACACCCGGTGAAGATCCTGTCTTAGCCGGTAGATATGCTGCGAATTACGTGAAGGGGCTACAGGGAACGGACGGTAACCGGTTGAAGGTGGCGGCTTGTTGCAAGCACTTTACGGCTTATGATCTGGATAATTGGAACGGGGTTGATCGGTTTCACTTTAACGCGCGGGTTAGCAAGCAGGACATAGAGGATACATTCGACGTGCCATTTAGGATGTGTGTGAAGGAAGGCAAAGTGGCCAGTGTGATGTGTTCTTACAATCAAGTAAATGGTGTCCCCACATGTGCCGACCCCAAACTCCTAAAGAAAACAGTGCGTGGTCAATGGGGTCTTGATGGGTACATTGTATCGGACTGTGATTCCGTTGGGGTGTTTTACAGCAGCCAACATTATACTAAAACGCCGGAAGAAGCAGCTGCCGATGCCATTAAAGCAGGTTTGGATTTGGACTGTGGACCTTTCCTGGGACTACACACGCAGGATGCCGTTAAACGAGGGTTGCTAACTGAAGCTGATGTCAACGGTGCTTTGACGAATACACTGAGTGTCCAAATGAGACTGGGGATGTTCGATGGGTCTGAGCCTTATGGCAATCTGGGACCAAGAGACGTGTGCAGCACTGCTCACCGAGAGCTGGCCCTTGAAGCTGCCAGACAGGGAATTGTACTCCTTAAGAACACTGGACCTTCTTTGCCCCTCTCCCGACGCCGTCACCGTACCGTTGCTGTCATTGGGCCCAATTCTAACGCCACAGTTACCATGATCGGCAACTATGCTGGTGTTGCTTGTGGATTCACCAGTCCTCTACAAGGAATAGGGAGCTACGCTAAGACACTTCACCAACTCGGGTGCGTGGATGTGGCTTGCAAGGATGACAGTCAATTCCAAGCAGCTATTGATGCAGCCCGTCAAGCAGATGCAACGGTTCTCGTGATGGGCCTGGACCAGTCCATTGAGGCCGAAACCGTGGACAGAGCCGGTCTCCTTCTTCCTGGGCGTCAACAAGACCTTGTGTCCAAGGTGGCCGCTGCTTCTAAGGGACCCACCATATTGGTCTTGATGTCTGGTGGGCCTGTCGACATAACTTTCGCAAAGAATGATCCACGTGTGAAGGGCATTTTATGGTCTGGTTATCCGGGCCAAGCTGGCGGCGCTGCCATTGCAGACATCTTGTTCGGAGCCGCCAACCCAGGGGGCAAGCTCCCAATGACATGGTACCCACAAGAATACCTCACAAATTTGCCAATGACAAATATGGCAATGAGACCAAGCAGATCCGCGGGGTACCCAGGAAGAACGTATAGGTTTTACAAGGGTCCAATGGTGTACCCATTTGGGCACGGATTGAGCTATACCCACTTCGTTCACACGTTAGCAAGTGCACCTACAATGGTGTCAGTTCCCTTGAATGGCCACCGCAGAGGCAATAGCAGTAACAATATTTCAAACAAGGCAATTAGAGTGACACATGCGAGATGTGGGAAGCTGTCGATGAGCCTCCATGTGGACGTTAAAAACGTAGGGTCCAAGGACGGCACTCACACATTGTTAGTGTTCTCGGCGCCACCTGCCGGCGGTGGTCATTGGGCACCGCATAAGCAACTGGTGGCATTTGAGAAAGTGCATGTCCCTGCCAGGTCTCAGCAGCGAGTCCAAGTCAATATTCACGTGTGCAAGTTCCTAAGTGTCGTGGACAAATCTGGTATTCGAAGAATCCCAATGGGCCAACACAGCATTCACGTTGGTGATGTCAAGCACTCCGTATCACTTCAAGCACAAACACTGGGGATTATCAAATCTTA 2327 0.5213 MAPTSMPCPCSSLVALFVVLVLAVTGGEARDPFACDPRDVNNKNLPFCRVSVPIAERVKDLIGRLTLQEKVSLLVDNAAPVPRLGIKGYEWWSEALHGVSNVGPGTKFTGPFPAATSFPQVITTAASFNASLWEAIGRVVSDEARAMYNGGSAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGRYAANYVKGLQGTDGNRLKVAACCKHFTAYDLDNWNGVDRFHFNARVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPKLLKKTVRGQWGLDGYIVSDCDSVGVFYSSQHYTKTPEEAAADAIKAGLDLDCGPFLGLHTQDAVKRGLLTEADVNGALTNTLSVQMRLGMFDGSEPYGNLGPRDVCSTAHRELALEAARQGIVLLKNTGPSLPLSRRRHRTVAVIGPNSNATVTMIGNYAGVACGFTSPLQGIGSYAKTLHQLGCVDVACKDDSQFQAAIDAARQADATVLVMGLDQSIEAETVDRAGLLLPGRQQDLVSKVAAASKGPTILVLMSGGPVDITFAKNDPRVKGILWSGYPGQAGGAAIADILFGAANPGGKLPMTWYPQEYLTNLPMTNMAMRPSRSAGYPGRTYRFYKGPMVYPFGHGLSYTHFVHTLASAPTMVSVPLNGHRRGNSSNNISNKAIRVTHARCGKLSMSLHVDVKNVGSKDGTHTLLVFSAPPAGGGHWAPHKQLVAFEKVHVPARSQQRVQVNIHVCKFLSVVDKSGIRRIPMGQHSIHVGDVKHSVSLQAQTLGIIKS 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03083 775 Pfam Fibronectin type III-like domain 691 758 IPR026891 -
Bva04g03083 775 PANTHER SUGAR HYDROLASE-RELATED 10 771 IPR044993 GO:0009044|GO:0045493
Bva04g03083 775 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 10 771 - -
Bva04g03083 775 SMART Fn3_like_2 689 760 IPR026891 -
Bva04g03083 775 Gene3D Immunoglobulins 651 773 IPR013783 -
Bva04g03083 775 Gene3D - 382 627 IPR036881 GO:0004553|GO:0005975
Bva04g03083 775 Gene3D - 57 371 IPR036962 GO:0004553|GO:0005975
Bva04g03083 775 PRINTS Glycosyl hydrolase family 3 signature 118 137 IPR001764 GO:0004553|GO:0005975
Bva04g03083 775 PRINTS Glycosyl hydrolase family 3 signature 205 221 IPR001764 GO:0004553|GO:0005975
Bva04g03083 775 PRINTS Glycosyl hydrolase family 3 signature 279 297 IPR001764 GO:0004553|GO:0005975
Bva04g03083 775 Pfam Glycosyl hydrolase family 3 N terminal domain 113 354 IPR001764 GO:0004553|GO:0005975
Bva04g03083 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 396 626 IPR002772 GO:0004553|GO:0005975
Bva04g03083 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 396 629 IPR036881 GO:0004553|GO:0005975
Bva04g03083 775 SUPERFAMILY (Trans)glycosidases 45 395 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03083 Bva-Chr4 25493063 25497609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03083 14 775 Glycoside Hydrolase AT1G02640 74.510 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03083 - - gmx:100798630 1336.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03083 04 25493063 25497609 Bva13g03045 13 21618100 21621853 BWGD