Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02930 ATGGGAGTTGTCACTGTTGGTGAATTAAAGTCCAGCATTTCTGGGAAGAGATCCTTTCGTCCAAGTTCAAGTATAAGACATGCCACTGAATGGCCAATATCTGATGTCTCTAGCGATCTTACCATCGAAGTGGGAGCATCCAGCTTTGCACTTCACAAGTTTCCTCTAGTTTCTCGAAGTGGAAGAATTCGGAAGCTGCTATTGGAAGCAAAAGATTCAAAAGTTTCACGCATAAGTCTTCCTAGTGTGCCGGGTGGAGCAGAGGCTTTTGAGCTAGCTGCCAAGTTCTGTTATGGAATTAACGTTGAGGTCACCCTCTCAAATGTTGCTATGCTACGTTGTGTAGCGCATTTTCTTGAAATGACAGAAGAATTTTCGGAGAAAAACTTGGAAACCCGAGCTGAAGCATATCTGAAAGagacaattttttcaaatatatcaaGCTCAATATCGGTTCTTCATCGTTGTGAAACCCTTCTGCCCGTAGCAGAAGAGATAAACCTTGTTTCTAGGCTAATCAATTCGATTGCAAATAATGCATGCAAGGAGCAGCTCACCTCTGGCTTGCTAAAACTGGACCATAATTTCCCTGCAAAAGCTATCGAACCAGAAACGCCCTCAGATTGGTGGGGAAAATCTCTTTCAGTTCTTATTCTTGATTTCTTCCAACGTGTTCTATCTGCAGTGAAGTCAAAGGGGTTAAAACAGGACATGATCAGcaagattttgataaattacGCTCATAATTCTCTTCAGGGAATTGTTGTTAAGGACCCCCAAGTGGTCAGAGGAAGTTTACTCGACTTAGAATTGCAGAAGAAGCAAAGGGTCATCGTTGAAGCCATAGCTGGCTTACTACCAACTCCATCAAGGAAATGTCCAGTTCCAATGGCATTTCTATCAAGTTTGTTGAAAGCTGCAATAGCAGCATCGACTTCTACTTCTTGCAGATCTGATTTAGAGAGGCGGATAGGTCTGCAACTTGACCAGGCTATTCTTGAAGACTTGTTAATTCCAGCAAATTCACATCAAAATGGCCACAGCACAATGTACGATACAGATTCAATCTTGAGgatcttttccattttcctaAACTTGGATGAGGATGATGACGAAGATAGTCACATGAGAGATGAAAGTGAGATGGTATATGACTTTGACAGCCCGGGATCTCCAAAACAAAGCTCAATTCTAAAGGTATCCAAGTTGTTGGACAATTATCTAGCTGAAGTAGCACTAGACTCCAATTTGTCGCCATCAAAATTCATAGCCCTTGCAGAATTACTACCAGATCATGCACGCATTGTAAGCGACGGACTCTACAGAGCTGTTGACATCTTCCTTAAGGTTCATCCAAATATAAAGGACTCAGAGCGCTACCGCCTATGCAAAACCATTGACTGTCAAAAATTATCTCAAGAAGCATGCAGCCATGCAGCACAGAATGAAAGGCTGCCAGTGCAGATGGCAGTTCAAGTTCTTTACTTTGAGCAAATCAGGCTGCGAAATGCTATGAATGGTGGACACAATCAGTTCTTCTTTGGTTCAATGAATGGCCAATTCCCTCAACGTTCAGGCAGTGGTGCAGGAAGTGGAGCCATTTCTCCTAGAGATAATTATGCTTCTGTAAGAAGAGAGAATCGAGAGTTGAAGCTAGAAGTTGCTAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGATCATGTCTCTATGAAGCAGGAGCTGGTGAGGTCTCATCCTGCTAACAAgttatttaaatcatttaccAAAAAGTTAGGCAAGCTCAAGCTCAATTCTCTATTTCGGATCAACAGTATTAAGCCAATTGGTGGGAAAGCTAGCTCAGAAAGCAGGTTCCCTTTTCAAAAGCGAAGGCGTCACTCAGTTTCATG 1892 0.4123 MGVVTVGELKSSISGKRSFRPSSSIRHATEWPISDVSSDLTIEVGASSFALHKFPLVSRSGRIRKLLLEAKDSKVSRISLPSVPGGAEAFELAAKFCYGINVEVTLSNVAMLRCVAHFLEMTEEFSEKNLETRAEAYLKETIFSNISSSISVLHRCETLLPVAEEINLVSRLINSIANNACKEQLTSGLLKLDHNFPAKAIEPETPSDWWGKSLSVLILDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGIVVKDPQVVRGSLLDLELQKKQRVIVEAIAGLLPTPSRKCPVPMAFLSSLLKAAIAASTSTSCRSDLERRIGLQLDQAILEDLLIPANSHQNGHSTMYDTDSILRIFSIFLNLDEDDDEDSHMRDESEMVYDFDSPGSPKQSSILKVSKLLDNYLAEVALDSNLSPSKFIALAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQFFFGSMNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVRSHPANKLFKSFTKKLGKLKLNSLFRINSIKPIGGKASSESRFPFQKRRRHSVS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02930 630 ProSiteProfiles NPH3 domain profile. 208 500 IPR027356 -
Bva13g02930 630 Pfam BTB/POZ domain 37 139 IPR000210 GO:0005515
Bva13g02930 630 Coils Coil 540 574 - -
Bva13g02930 630 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 623 - -
Bva13g02930 630 PANTHER OS12G0117600 PROTEIN 25 623 IPR043454 -
Bva13g02930 630 SUPERFAMILY POZ domain 22 123 IPR011333 -
Bva13g02930 630 Gene3D Potassium Channel Kv1.1; Chain A 23 146 IPR011333 -
Bva13g02930 630 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Bva13g02930 630 MobiDBLite consensus disorder prediction 611 630 - -
Bva13g02930 630 Pfam NPH3 family 208 476 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02930 Bva-Chr13 21076410 21080015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02930 1 450 EF-hand Containing Proteins AT2G47860 62.083 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02930 - - rcu:8287167 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02978 04 25020370 25024230 Bva13g02930 13 21076410 21080015 BWGD
Bva13g02930 13 21076410 21080015 Bva13g02930 13 21076410 21080015 ECH