Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02915 ATGAAGAAAATGGCGCACTCCTTCCCTGAGGAGGTCCTCGAGCACGTGTTCTCATTCATTCAGTCGGACGGAGACCGAAACGCGATATCTTTGGTGTGTAAGTCATGGTATGAGATCGAACGATGGTGCAGGAAGCGGATTTTCATTGGGAACTGTTATGCTGTGAGCCCTGCGACGGTTATCAAACGGTTCCCGGAGGTGAGATCCATTGAGCTCAAAGGAAAGCCTCACTTTGCTGACTTCAATTTAGTGCCAGAGGGTTGGGGTGGTTATGTGTACCCCTGGATTGCAGCTATGGCTAGTGAATGTCCCTGGTTAGAGGAGATTAGACTCAAGAGGACGGTCATAACGGACGAAAGCTTGGAGTTGATTGCCAAATCCTTTAAAAACTTCAAAGTCTTAGTGCTGTCTTCCTGTGAGGGATTTAGTACTGATGGACTCGCTGCCATTGCCGCCAATTGCAgGAATTTGAGAGAATTGGACTTGCGGGAGAGTGAAGTAGATGACCCTAGTGGGCATTGGCTAAGCCACTTTCCCGATTCCTATACTTCGTTAGTTTCCCTCAATATTGCATGCTTGGGCACTGAGGTGAATTTCTCTGCACTAGAGCGCCTTGTTGGCAGATGCCCCAACCTGCAGACTCTCCGTCTCAACCGTGCTGTGCCCCTTGATAAGCTGGCCAACCTGCTTCGCCGGGCACCTCAGCTAGTTGAGTTCGGCACGGGAGTCTACTCAACTGAGATGCGACCTGAGGTTTTCGCAAACCTCTCTGCATCATTTACTGGATGCAAGGAATTGAGAGGCCTGTCTGGTTTTTGGGATGTGCTCCCATCCTTTCTTCCAGCTGTCTATCCTATCTGCTCCAAGCTAACTTCTCTAAACTTAAGTTATGCTGCAGTTCAAAGCTCAGATCTTATCAAGCTTGTCAGTCAATGTCAGAATTTGCAACGTTTATTGGTGCTGGATTACATTGAAGATACGGGCCTCGAGGCCCTTGCAGCATCGTGCAAAGATCTGAGGGAACTTAGGGTGTTCCCATCTGACCCTTTTGGGTTAGAACCAAATGTAGCCTTGACAGAACAGGGGCTTGTCTCGGTGTCAGAAGGCTGCCCCAAGCTGCAATCAGTTCTATATTTCTGTCGTCAAATGTCTAATGCTGCCCTCATTACAATTGCCCATAACAGGCCTAATCTGACTCGTTTTCGCCTATGTATTATTGAGCCTCGAACTCCTGACTACCTTACTCTCGAACCCCTGGATGTTGGATTTGGAGCTATTGTTGAGCATTGCAGGGATCTCCAGCGCTTATCCCTTTCTGGTCTGTTGACTGATCGTGTTTTTGAGTACATTGGAACGTATTCAAAGAAGCTGGAGATGCTTTCTGTGGCTTTTGCTGGAGACAGTGATTCGGGACTCCACCATATATTGTCTGGGTGTGAAAGCCTTCGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAGGCCCTCTTGGCAAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTAAGTTATGGAGCATGTAAACTGCTGGGTCAGAAAATGCCCAGACTGAACGTTGAAGTGATTGATGAGAGGGGACCTCCAGAATCAAGACCAGAAAGTTGTCCTGTTGAGAAGCTCTACGTATACAGGTCTGTCGCTGGGACAAGAAGGGACATGCCTGGTTTTGTGCGGACAATGAAAGATGCTTCTTCAGTAAGGCTTTCTTG 1754 0.4835 MKKMAHSFPEEVLEHVFSFIQSDGDRNAISLVCKSWYEIERWCRKRIFIGNCYAVSPATVIKRFPEVRSIELKGKPHFADFNLVPEGWGGYVYPWIAAMASECPWLEEIRLKRTVITDESLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRELDLRESEVDDPSGHWLSHFPDSYTSLVSLNIACLGTEVNFSALERLVGRCPNLQTLRLNRAVPLDKLANLLRRAPQLVEFGTGVYSTEMRPEVFANLSASFTGCKELRGLSGFWDVLPSFLPAVYPICSKLTSLNLSYAAVQSSDLIKLVSQCQNLQRLLVLDYIEDTGLEALAASCKDLRELRVFPSDPFGLEPNVALTEQGLVSVSEGCPKLQSVLYFCRQMSNAALITIAHNRPNLTRFRLCIIEPRTPDYLTLEPLDVGFGAIVEHCRDLQRLSLSGLLTDRVFEYIGTYSKKLEMLSVAFAGDSDSGLHHILSGCESLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPESRPESCPVEKLYVYRSVAGTRRDMPGFVRTMKDASSVRLS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02915 584 SMART fbox_2 8 49 IPR001810 GO:0005515
Bva13g02915 584 Gene3D - 1 44 - -
Bva13g02915 584 SUPERFAMILY RNI-like 28 533 - -
Bva13g02915 584 Pfam Transport inhibitor response 1 protein domain 65 111 IPR041101 -
Bva13g02915 584 SMART LRR_CC_2 312 335 IPR006553 -
Bva13g02915 584 SMART LRR_CC_2 287 311 IPR006553 -
Bva13g02915 584 SMART LRR_CC_2 370 394 IPR006553 -
Bva13g02915 584 SMART LRR_CC_2 479 503 IPR006553 -
Bva13g02915 584 SMART LRR_CC_2 128 153 IPR006553 -
Bva13g02915 584 SMART LRR_CC_2 430 453 IPR006553 -
Bva13g02915 584 SMART LRR_CC_2 103 127 IPR006553 -
Bva13g02915 584 Pfam F-box 7 46 IPR041567 -
Bva13g02915 584 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 5 575 - -
Bva13g02915 584 Gene3D Ribonuclease Inhibitor 45 575 IPR032675 -
Bva13g02915 584 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 5 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02915 Bva-Chr13 21027791 21031347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02915 K14485 - jre:108997972 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02967 04 24983071 24986882 Bva13g02915 13 21027791 21031347 BWGD
Bva13g02915 13 21027791 21031347 Bva13g02915 13 21027791 21031347 ECH